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The map label for this gene is ybaT [C]

Identifier: 15668789

GI number: 15668789

Start: 537770

End: 539077

Strand: Reverse

Name: ybaT [C]

Synonym: MJ0609

Alternate gene names: 15668789

Gene position: 539077-537770 (Counterclockwise)

Preceding gene: 15668790

Following gene: 15668788

Centisome position: 32.38

GC content: 34.1

Gene sequence:

>1308_bases
ATGGAGTTAAAAAATAAAAAGCTTAGTTTGTGGGAAGCTGTTTCTATGGCTGTTGGTGTAATGATTGGGGCAAGTATATT
TTCTATATTTGGAGTTGGAGCTAAAATAGCTGGAAGAAACCTTCCAGAAACATTTATATTGTCTGGAATTTATGCACTTT
TAGTTGCTTATTCCTATACAAAACTTGGAGCAAAGATAGTTTCAAATGCGGGACCTATTGCATTCATCCATAAAGCCATT
GGAGATAATATAATAACTGGAGCTTTGAGCATTTTATTATGGATGAGTTACGTTATATCCATTGCTCTATTTGCAAAAGG
GTTTGCTGGCTATTTCTTACCTTTAATAAATGCTCCAATAAATACATTCAATATTGCCATAACTGAAATAGGCATAGTTG
CGTTTTTCACTGCTCTGAATTTCTTTGGTTCTAAGGCTGTAGGGAGGGCTGAATTTTTTATTGTTTTGGTTAAGCTCTTA
ATATTAGGGTTGTTTATATTTGCTGGGTTGATAACAATTCATCCATCTTATGTAATTCCAGATTTAGCCCCATCTGCAGT
AAGTGGGATGATTTTTGCATCAGCTATATTCTTCCTATCATATATGGGTTTTGGAGTTATAACTAATGCCTCAGAACATA
TTGAAAACCCTAAAAAGAACGTTCCAAGGGCTATATTTATAAGCATATTGATTGTGATGTTTGTGTATGTTGGAGTAGCC
ATTTCAGCAATAGGAAATTTACCAATAGATGAACTAATTAAAGCCAGTGAAAATGCCTTAGCAGTGGCGGCAAAACCATT
CTTAGGAAACTTAGGGTTTTTATTAATATCTATAGGAGCTTTATTTTCAATTTCATCAGCAATGAACGCCACAATATACG
GAGGGGCTAATGTTGCCTATTCATTAGCAAAAGACGGAGAACTTCCAGAATTCTTTGAGAGAAAGGTATGGTTTAAATCC
ACAGAGGGACTTTATATAACCTCAGCCCTTGGAGTGTTGTTTGCATTACTGTTTAATATGGAGGGGGTGGCATCAATAAC
AAGTGCCGTATTTATGGTTATATATCTCTTTGTTATTCTCTCCCACTATATCCTTATCGATGAAGTTGGAGGGAGAAAAG
AGATTGTAATCTTTAGCTTTATTGTTGTATTAGGAGTTTTTCTACTTTTATTGTATTATCAGTGGATAACCAATAGATTT
GTGTTTTATGGGATAATAGCAACATTTATTGGAGTGCTGATATTTGAGATTATCTATAGAAAAGTAACAAAAAGAACATT
CTCCAACAATATGTATGTTAAAAGCTAA

Upstream 100 bases:

>100_bases
CTTATGACTATATAGTTGTAAATTCAGCTATTGGAGTTAAAAAAGAGGATATCTACAAAGTTATTGAGAAGTTGGATGAG
GTTTTATAAAAAGGGATAAC

Downstream 100 bases:

>100_bases
ATTTTAACATTATTAACATTAAAGCTGTAGGAGGTCGTGCTGTATCGTGGTCATCTTCATTGAGCAAAAGCCCTCTTCCC
ACGACGCGCCCAGACCTCCT

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAI
GDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLL
ILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKS
TEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRF
VFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS

Sequences:

>Translated_435_residues
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAI
GDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLL
ILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKS
TEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRF
VFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS
>Mature_435_residues
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAI
GDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLL
ILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKS
TEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRF
VFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI115648063, Length=327, Percent_Identity=26.2996941896024, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI115648022, Length=327, Percent_Identity=26.2996941896024, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1786694, Length=424, Percent_Identity=32.0754716981132, Blast_Score=206, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI32566699, Length=283, Percent_Identity=30.7420494699647, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17532491, Length=349, Percent_Identity=24.6418338108883, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17540018, Length=325, Percent_Identity=27.0769230769231, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17568033, Length=325, Percent_Identity=25.5384615384615, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221512776, Length=401, Percent_Identity=25.1870324189526, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24666159, Length=401, Percent_Identity=25.1870324189526, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24668806, Length=406, Percent_Identity=22.6600985221675, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21356285, Length=406, Percent_Identity=22.6600985221675, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24668802, Length=406, Percent_Identity=22.6600985221675, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281366235, Length=411, Percent_Identity=24.330900243309, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007820, Length=411, Percent_Identity=24.330900243309, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24651635, Length=321, Percent_Identity=26.791277258567, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651633, Length=321, Percent_Identity=26.791277258567, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24667468, Length=335, Percent_Identity=25.0746268656716, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357367, Length=332, Percent_Identity=25.9036144578313, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221331183, Length=324, Percent_Identity=25.3086419753086, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI17647653, Length=324, Percent_Identity=25.3086419753086, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24664379, Length=324, Percent_Identity=25.3086419753086, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI116007818, Length=417, Percent_Identity=24.220623501199, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85725152, Length=417, Percent_Identity=24.220623501199, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550968, Length=328, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19921172, Length=328, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y609_METJA (Q58026)

Other databases:

- EMBL:   L77117
- PIR:   A64376
- RefSeq:   NP_247591.1
- PDB:   3GI8
- PDB:   3GI9
- PDB:   3GIA
- PDBsum:   3GI8
- PDBsum:   3GI9
- PDBsum:   3GIA
- ProteinModelPortal:   Q58026
- GeneID:   1451474
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0609
- NMPDR:   fig|243232.1.peg.628
- TIGR:   MJ0609
- HOGENOM:   HBG575406
- OMA:   GVITNAS
- ProtClustDB:   CLSK876260
- BioCyc:   MJAN243232:MJ_0609-MONOMER
- InterPro:   IPR004841
- InterPro:   IPR002293
- PANTHER:   PTHR11785
- PIRSF:   PIRSF006060

Pfam domain/function: PF00324 AA_permease

EC number: NA

Molecular weight: Translated: 47358; Mature: 47358

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc2e1a90)-; HASH(0xd1efb48)-; HASH(0xcb01914)-; HASH(0xd24bf2c)-; HASH(0x406cf1a4)-; HASH(0xcca2e88)-; HASH(0xbc49700)-; HASH(0xd23ae9c)-; HASH(0xae4ebbc)-; HASH(0xd220e4c)-; HASH(0xb585fa4)-; HASH(0xce34bdc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPI
HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIP
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHH
ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAY
HHHHCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHE
SLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVIL
EHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVTKRTFSNNMYVKS
HHHHHHHCCCCEECH
>Mature Secondary Structure
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPI
HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIP
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHH
ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAY
HHHHCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHE
SLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVIL
EHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVTKRTFSNNMYVKS
HHHHHHHCCCCEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087