Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668781
Identifier: 15668781
GI number: 15668781
Start: 532160
End: 532963
Strand: Direct
Name: 15668781
Synonym: MJ0601
Alternate gene names: NA
Gene position: 532160-532963 (Clockwise)
Preceding gene: 15668780
Following gene: 15668791
Centisome position: 31.96
GC content: 37.69
Gene sequence:
>804_bases ATGGTGAATCTAATGAATATAAAGGATATAAAGTTGAATGCAGATGAAACAAAAACAACTAAAGCTATATTGAAGGCAAG CTTTGATATGTGGTTAGATATTGTTGAAGCTGATGTTGTTATAGTTGGAGCTGGACCAAGTGGTTTAACATGTGCGAGAT ATTTGGCAAAAGAGGGCTTTAAAGTCGTTGTTTTAGAGAGGCATTTAGCATTTGGTGGAGGAACCTGGGGAGGAGGAATG GGCTTCCCATACATTGTTGTTGAAGAGCCAGCTGATGAGTTGTTGAGAGAGGTTGGAATTAAGTTAATTGATATGGGAGA TGGTTATTACGTTGCTGACTCTGTTGAAGTTCCTGCCAAATTGGCAGTTGCAGCAATGGATGCTGGAGCTAAAATATTGA CTGGAATTGTTGTTGAAGATTTAATTTTAAGAGAGGATGGAGTTGCGGGGGTTGTTATAAACAGCTATGCAATTGAAAGG GCTGGATTGCATATTGACCCATTGACTATAAGAAGTAAAGTTGTAGTTGATGCTACTGGGCATGAGGCTTCAATAGTTAA TATCCTTGTAAAAAAGAACAAGTTAGAGGCAGATGTTCCTGGAGAAAAATCAATGTGGGCTGAAAAGGGAGAAAATGCAT TATTAAGAAACACAAGAGAAGTTTATCCAAATCTATTTGTTTGTGGAATGGCTGCCAATGCCTCTCATGGCGGATACAGA ATGGGGGCAATATTTGGTGGAATGTATTTATCAGGGAAATTATGTGCAGAATTAATTACTGAAAAGTTGAAAAATAAAGA ATAA
Upstream 100 bases:
>100_bases AAATTGTGAATGATACCATTATTCAATTTCCAAAATGTATAAAAACTTGATCTTGAAAATAATATTGAAACTAAACTTTA AATAATATTAAAAATTACAG
Downstream 100 bases:
>100_bases TTTTAATTTTTTATACTCTCTTTTAATAAAACAATCTGCTCTCTCAATTTGTGATTTCCCACTTTTCTGGCAATATTTAA AATTGATTCAATCTCTTCAT
Product: ribulose-1,5-biphosphate synthetase
Products: NA
Alternate protein names: Ribulose 1,5-bisphosphate synthase; RuBP synthase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR MGAIFGGMYLSGKLCAELITEKLKNKE
Sequences:
>Translated_267_residues MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR MGAIFGGMYLSGKLCAELITEKLKNKE >Mature_267_residues MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR MGAIFGGMYLSGKLCAELITEKLKNKE
Specific function: Catalyzes the conversion of ribose 1,5-bisphosphate to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO
COG id: COG1635
COG function: function code H; Flavoprotein involved in thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the THI4 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6321583, Length=280, Percent_Identity=28.9285714285714, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RUBPS_METJA (Q58018)
Other databases:
- EMBL: L77117 - PIR: A64375 - RefSeq: NP_247583.1 - ProteinModelPortal: Q58018 - GeneID: 1451466 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0601 - NMPDR: fig|243232.1.peg.620 - TIGR: MJ0601 - HOGENOM: HBG325902 - OMA: GLHVDPL - ProtClustDB: PRK04176 - BioCyc: MJAN243232:MJ_0601-MONOMER - HAMAP: MF_00304 - InterPro: IPR003042 - InterPro: IPR002922 - InterPro: IPR022828 - PRINTS: PR00420 - TIGRFAMs: TIGR00292
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28656; Mature: 28656
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGF CCEECEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECEEEEECCCCCHHHHHHHHHCCC KVVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAK EEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCEEEECCCCEEEECCCCCCHH LAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIERAGLHIDPLTIRSKVVVDATG EEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEHHHCCCEECCEEEEEEEEEEECC HEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR CCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHCHHHHCCCEEEEEEECCCCCCCEE MGAIFGGMYLSGKLCAELITEKLKNKE HHHHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGF CCEECEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECEEEEECCCCCHHHHHHHHHCCC KVVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAK EEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCEEEECCCCEEEECCCCCCHH LAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIERAGLHIDPLTIRSKVVVDATG EEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEHHHCCCEECCEEEEEEEEEEECC HEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR CCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHCHHHHCCCEEEEEEECCCCCCCEE MGAIFGGMYLSGKLCAELITEKLKNKE HHHHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087