Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668730

Identifier: 15668730

GI number: 15668730

Start: 486008

End: 487105

Strand: Reverse

Name: 15668730

Synonym: MJ0550

Alternate gene names: NA

Gene position: 487105-486008 (Counterclockwise)

Preceding gene: 15668731

Following gene: 15668728

Centisome position: 29.26

GC content: 28.78

Gene sequence:

>1098_bases
ATGAACCAAATTATTAATGATAATTATAGGGAATTCTTAAAAAAATTAAGAGAGAGACATTTAAAAAAGAGAAAAGTTAA
AGATAAAAATAAACCTATTGCTGTGTGGATGCAAGATGATATATATAGAGATTTCAGCATAGGAAAGTCCCTTACAATAA
TTTTAAGGACAGAAGGCTGTTATTATGCAAAAGAAGGAGGCTGTTTAATGTGTTCCTATTTAATGGACTCCTCTCCTGAA
AAAATAACTGCTGAAAATATAATAAATCAGTTTAATTATGCGATTGAGAAATATAAAGAAAAAATAAAAGATTTAAAAGA
TTTCAGCGTTAAAATATTCACTTCTGGAAGTTTTTTGGATGATAGAGAAGTTCCTAAAGAGGCAAGAAATTATATTTTCA
AAAAACTTAGCGAATTTGATAATTTAAAAGAAGTGGCTATTGAATCAAGACCTGAATTTATTGATGAAGACAAATTAAAC
GAAATTAGAAAATATTTGGATGTTAATGTTGAAATTGGGGTTGGAATAGAAAGTTTTAATGAAGAAATTAGAGAAAAAGC
AATTAACAAAGGAATAACAAATGAACAAATAATTAGAGCTATAGAATTGGCTAAAAACTACAACATTGGGATAAAAGCTT
ATTTATTAATAAAACCTCTATTCATAACTGAAAAAGAGGCAATTTATGACTCAATATCTTCAGCAAATAAGTGTATAGAG
TTGGGATGTTCAAGAATATCCTTTTGCCCAGCTACTGTGCATAAAGGTAGTGTGATGGAATTCTTTTTCAACAAAAATCA
ATACCGCCCTCCATTTCTATGGAGTATAATTGAGATACTAAAAGAGGTTAAAAAAAGCAATCCAAAGGCATTAATTATGT
GTGATACATCAGGAGTAGGAAGTGAAAGAGGGGCTCACAACCTTTATAACTGCAAGTGCAACAAATTGATTAAAGAAAGG
TTAGAGAGATTCACTTTGACACAGGATATAAATGTTTTAAATGTTGAATGTGAATGTAAAAATATATGGAATGCATATAT
CGAAGTTGAAAATAAAAATATAGTTCCATTAGGGGATGAAAGAAAACTCCTATTATAA

Upstream 100 bases:

>100_bases
TGATAAGCTTATATGCAAAGTTTGGAAAGGGTAGGATGGCAGATTTTGTTGAAAACTATGGGATTGAAAACTTAAGAAAT
AACATAAAAGAGTTGATAAA

Downstream 100 bases:

>100_bases
AAATTTATTCTGGAATCTGTCCTCCTGGAACCATAACACTTAACTTAACTTGTTTAACTCCTTTTAAGGCTGTTAATCTA
TCTGTTAATTCCCTAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNQIINDNYREFLKKLRERHLKKRKVKDKNKPIAVWMQDDIYRDFSIGKSLTIILRTEGCYYAKEGGCLMCSYLMDSSPE
KITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSGSFLDDREVPKEARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLN
EIRKYLDVNVEIGVGIESFNEEIREKAINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIE
LGCSRISFCPATVHKGSVMEFFFNKNQYRPPFLWSIIEILKEVKKSNPKALIMCDTSGVGSERGAHNLYNCKCNKLIKER
LERFTLTQDINVLNVECECKNIWNAYIEVENKNIVPLGDERKLLL

Sequences:

>Translated_365_residues
MNQIINDNYREFLKKLRERHLKKRKVKDKNKPIAVWMQDDIYRDFSIGKSLTIILRTEGCYYAKEGGCLMCSYLMDSSPE
KITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSGSFLDDREVPKEARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLN
EIRKYLDVNVEIGVGIESFNEEIREKAINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIE
LGCSRISFCPATVHKGSVMEFFFNKNQYRPPFLWSIIEILKEVKKSNPKALIMCDTSGVGSERGAHNLYNCKCNKLIKER
LERFTLTQDINVLNVECECKNIWNAYIEVENKNIVPLGDERKLLL
>Mature_365_residues
MNQIINDNYREFLKKLRERHLKKRKVKDKNKPIAVWMQDDIYRDFSIGKSLTIILRTEGCYYAKEGGCLMCSYLMDSSPE
KITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSGSFLDDREVPKEARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLN
EIRKYLDVNVEIGVGIESFNEEIREKAINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIE
LGCSRISFCPATVHKGSVMEFFFNKNQYRPPFLWSIIEILKEVKKSNPKALIMCDTSGVGSERGAHNLYNCKCNKLIKER
LERFTLTQDINVLNVECECKNIWNAYIEVENKNIVPLGDERKLLL

Specific function: Unknown

COG id: COG1244

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y550_METJA (Q57970)

Other databases:

- EMBL:   L77117
- PIR:   F64368
- RefSeq:   NP_247529.1
- ProteinModelPortal:   Q57970
- GeneID:   1451415
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0550
- NMPDR:   fig|243232.1.peg.566
- TIGR:   MJ0550
- HOGENOM:   HBG546268
- OMA:   KRGPHNC
- ProtClustDB:   CLSK876244
- BioCyc:   MJAN243232:MJ_0550-MONOMER
- InterPro:   IPR005909
- InterPro:   IPR006638
- InterPro:   IPR007197
- PIRSF:   PIRSF004954
- SMART:   SM00729
- TIGRFAMs:   TIGR01210

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 42519; Mature: 42519

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIINDNYREFLKKLRERHLKKRKVKDKNKPIAVWMQDDIYRDFSIGKSLTIILRTEGC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEEEEEECCE
YYAKEGGCLMCSYLMDSSPEKITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSGSFLD
EEECCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
DREVPKEARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLNEIRKYLDVNVEIGVGIESFN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHH
EEIREKAINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIE
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHH
LGCSRISFCPATVHKGSVMEFFFNKNQYRPPFLWSIIEILKEVKKSNPKALIMCDTSGVG
HCCHHHCCCCHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
SERGAHNLYNCKCNKLIKERLERFTLTQDINVLNVECECKNIWNAYIEVENKNIVPLGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCEEEEEECCCEEECCCCC
RKLLL
CCCCC
>Mature Secondary Structure
MNQIINDNYREFLKKLRERHLKKRKVKDKNKPIAVWMQDDIYRDFSIGKSLTIILRTEGC
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEEEEEECCE
YYAKEGGCLMCSYLMDSSPEKITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSGSFLD
EEECCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
DREVPKEARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLNEIRKYLDVNVEIGVGIESFN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHH
EEIREKAINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIE
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHH
LGCSRISFCPATVHKGSVMEFFFNKNQYRPPFLWSIIEILKEVKKSNPKALIMCDTSGVG
HCCHHHCCCCHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
SERGAHNLYNCKCNKLIKERLERFTLTQDINVLNVECECKNIWNAYIEVENKNIVPLGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCEEEEEECCCEEECCCCC
RKLLL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087