Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668728

Identifier: 15668728

GI number: 15668728

Start: 484585

End: 485466

Strand: Reverse

Name: 15668728

Synonym: MJ0548

Alternate gene names: NA

Gene position: 485466-484585 (Counterclockwise)

Preceding gene: 15668730

Following gene: 15668727

Centisome position: 29.16

GC content: 30.27

Gene sequence:

>882_bases
GTGAGTTTAATTATTTGCTACTATGGTAAAAATGGGGCTGTAATTGGAGGAGATAGAAGGCAAATATTTTTTAGAGGTAG
TGAGGAGAATAGAAAGATTTTAGAAGAAAAACTATACAGTGGGGAGATAAAATCTGAAGAGGAACTTTATAAATTGGCAG
AAAAGCTTAACATTAAAATTATAATTGAAGATGATAGGGAAAAAGTTAGAAAGATATCTGATTCAGTAGTATGTGGAGAA
GTTAGGAGCTTAGGAATTGATGCAAAGAGAAGGAGGGTTTATGCAACAAAAGGGAAATGTGCCATTGTTGATATATTAAA
CGACACAGTTACAAATCAAACAATAAAAGAAGGTTTTGGAATTGTAGTTCTTGGAAACAGATTCTTAAAAAAGAAAGCTG
AGGAGGAATTAAAAAGAACAGCTAAATTATTCCCAATGATGCCTATACAACAGATAGAAGATGCAATAAAAGAAATTTTT
GAGAAATTAAAGTGGCATCCTACAGTGAGTAAAGAGTATGACATTTACAGTGTGAATAAATATGAAAAGAACTTTGAGGA
AGTTATTAAAAAGGATATTGAGAGCCTATTTAAATATAGGGAACAGTTGAGGAAACAACTCATAGATTTTGGAAAGGTTA
TGAGTATAGTCAATAAAATTGTAAAAAATGGAGAAATTGGAGTTATTAAAGATGGAAAACTTCACTTATATGATGATTAT
ATAGCTATCGATAAGATAGACCCAAATCCAAAGGTATTTAAAGTTGTGGATGTGGAAGGCAACTTTAAAGATGGTGATAT
AGTAGTTATTGAAAATGGAGATATGAAAATAAAAGGGACTAATGAGAAAGTAACAACCAAATATATCATAATTCATAAAT
AA

Upstream 100 bases:

>100_bases
TTTATTTTCAAACTAACAAATATTACTATTTAATAACTAATATATAAGATTAACGATAATAATAATACTAACTAATATTA
TTAGTCTAAGGGGTGAGAGA

Downstream 100 bases:

>100_bases
CATAGTCCTAAAGTTCAATAAGCAAATGTTGTTAGATAACCTTATTCAATTAATTAATGATGTAATGTTTTTGAAGATAA
GCGTGTCCTAATATTAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSLIICYYGKNGAVIGGDRRQIFFRGSEENRKILEEKLYSGEIKSEEELYKLAEKLNIKIIIEDDREKVRKISDSVVCGE
VRSLGIDAKRRRVYATKGKCAIVDILNDTVTNQTIKEGFGIVVLGNRFLKKKAEEELKRTAKLFPMMPIQQIEDAIKEIF
EKLKWHPTVSKEYDIYSVNKYEKNFEEVIKKDIESLFKYREQLRKQLIDFGKVMSIVNKIVKNGEIGVIKDGKLHLYDDY
IAIDKIDPNPKVFKVVDVEGNFKDGDIVVIENGDMKIKGTNEKVTTKYIIIHK

Sequences:

>Translated_293_residues
MSLIICYYGKNGAVIGGDRRQIFFRGSEENRKILEEKLYSGEIKSEEELYKLAEKLNIKIIIEDDREKVRKISDSVVCGE
VRSLGIDAKRRRVYATKGKCAIVDILNDTVTNQTIKEGFGIVVLGNRFLKKKAEEELKRTAKLFPMMPIQQIEDAIKEIF
EKLKWHPTVSKEYDIYSVNKYEKNFEEVIKKDIESLFKYREQLRKQLIDFGKVMSIVNKIVKNGEIGVIKDGKLHLYDDY
IAIDKIDPNPKVFKVVDVEGNFKDGDIVVIENGDMKIKGTNEKVTTKYIIIHK
>Mature_292_residues
SLIICYYGKNGAVIGGDRRQIFFRGSEENRKILEEKLYSGEIKSEEELYKLAEKLNIKIIIEDDREKVRKISDSVVCGEV
RSLGIDAKRRRVYATKGKCAIVDILNDTVTNQTIKEGFGIVVLGNRFLKKKAEEELKRTAKLFPMMPIQQIEDAIKEIFE
KLKWHPTVSKEYDIYSVNKYEKNFEEVIKKDIESLFKYREQLRKQLIDFGKVMSIVNKIVKNGEIGVIKDGKLHLYDDYI
AIDKIDPNPKVFKVVDVEGNFKDGDIVVIENGDMKIKGTNEKVTTKYIIIHK

Specific function: Unknown

COG id: COG4079

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y548_METJA (Q57968)

Other databases:

- EMBL:   L77117
- PIR:   D64368
- RefSeq:   NP_247527.1
- ProteinModelPortal:   Q57968
- GeneID:   1451413
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0548
- NMPDR:   fig|243232.1.peg.564
- TIGR:   MJ0548
- HOGENOM:   HBG539080
- OMA:   IGYYGKN
- ProtClustDB:   CLSK876243
- BioCyc:   MJAN243232:MJ_0548-MONOMER
- InterPro:   IPR016754
- PIRSF:   PIRSF019262

Pfam domain/function: PF09894 DUF2121

EC number: NA

Molecular weight: Translated: 33878; Mature: 33747

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIICYYGKNGAVIGGDRRQIFFRGSEENRKILEEKLYSGEIKSEEELYKLAEKLNIKI
CEEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
IIEDDREKVRKISDSVVCGEVRSLGIDAKRRRVYATKGKCAIVDILNDTVTNQTIKEGFG
EEECCHHHHHHHHCCCEEHHHHHCCCCHHHCEEEEECCCEEEEEECCCHHHHHHHHCCCC
IVVLGNRFLKKKAEEELKRTAKLFPMMPIQQIEDAIKEIFEKLKWHPTVSKEYDIYSVNK
EEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHH
YEKNFEEVIKKDIESLFKYREQLRKQLIDFGKVMSIVNKIVKNGEIGVIKDGKLHLYDDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECE
IAIDKIDPNPKVFKVVDVEGNFKDGDIVVIENGDMKIKGTNEKVTTKYIIIHK
EEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEEC
>Mature Secondary Structure 
SLIICYYGKNGAVIGGDRRQIFFRGSEENRKILEEKLYSGEIKSEEELYKLAEKLNIKI
EEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
IIEDDREKVRKISDSVVCGEVRSLGIDAKRRRVYATKGKCAIVDILNDTVTNQTIKEGFG
EEECCHHHHHHHHCCCEEHHHHHCCCCHHHCEEEEECCCEEEEEECCCHHHHHHHHCCCC
IVVLGNRFLKKKAEEELKRTAKLFPMMPIQQIEDAIKEIFEKLKWHPTVSKEYDIYSVNK
EEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHH
YEKNFEEVIKKDIESLFKYREQLRKQLIDFGKVMSIVNKIVKNGEIGVIKDGKLHLYDDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECE
IAIDKIDPNPKVFKVVDVEGNFKDGDIVVIENGDMKIKGTNEKVTTKYIIIHK
EEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087