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The map label for this gene is ycdQ [C]

Identifier: 15668724

GI number: 15668724

Start: 481914

End: 482603

Strand: Reverse

Name: ycdQ [C]

Synonym: MJ0544

Alternate gene names: 15668724

Gene position: 482603-481914 (Counterclockwise)

Preceding gene: 15668725

Following gene: 15668723

Centisome position: 28.99

GC content: 30.29

Gene sequence:

>690_bases
ATGATTGCAATAATTCCAGCATTCAATGAGGAAAAAAATATTTTAAAGGTGTTAAAGGACTTAGAAAAGTTAAGAGTTGA
TGCTGTAGTAGTGGATGATGGTTCTAAAGACAATACCTCAAAAATCGTTGAAGAGTTTGCAAAAAAAGCAAAGATTAATG
TATATTTAATAAGAAATGAAAAAAATGAAGGAAAGGCAAAAGCAATAGAGAAAGGAACAAAATTTGCCTTATCTTTAAAC
AAATATAAATATATCATATATATTGATGGAGATTATCAGCACAAACCAATGGACATTCCAAAACTGTTAAAAAAATTGGA
AGATACAAATGCTGATGCCGTTTTTGGTATTAGGAAATACAAACATATTCCATTGCATAGGCAAATATCTAATTTTTTTG
CTTCAATACTTACGTCGTTGGCAGTGTTAATATACTCAAAAAGATTTTATTTCTTTAGGGATGTTCAGTGTGGTTTTAGG
ATAATAAAGGCAGAGTTTTTAAAAGATATGAAGTTTGGAGATGGTTATGCAGTTGAACATTTTATTGCTCTGCAGTTAGC
GAAAAAAGGGGCTAAGATTGTGGAGGAATATGTGAGTGTTGAGTATCATGATGAAGCTGTTTCATATATAACCACAAAGA
AAATCTTAGAAGTTGCTAAGCAGGTTATAAAGTTCATTTTTTTAGAGTAG

Upstream 100 bases:

>100_bases
TAAAAACACCAATTCCTATTTTTCTACTTTTTCTTATTACCATAAAATTTTAAAATTTTGTTAAAAATTTACTAGCATCC
AATTTATATTGTGATTACCT

Downstream 100 bases:

>100_bases
CAAAATAACAGTAAGCTTTAAATATTAAGTTAAAAATATTAGCATCACAATAAATTTTATATATTGGGAATTGAAAACAC
ACATAGTCCTTCTCTTTATC

Product: dolichyl-phosphate mannose synthase

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIAIIPAFNEEKNILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKINVYLIRNEKNEGKAKAIEKGTKFALSLN
KYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADAVFGIRKYKHIPLHRQISNFFASILTSLAVLIYSKRFYFFRDVQCGFR
IIKAEFLKDMKFGDGYAVEHFIALQLAKKGAKIVEEYVSVEYHDEAVSYITTKKILEVAKQVIKFIFLE

Sequences:

>Translated_229_residues
MIAIIPAFNEEKNILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKINVYLIRNEKNEGKAKAIEKGTKFALSLN
KYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADAVFGIRKYKHIPLHRQISNFFASILTSLAVLIYSKRFYFFRDVQCGFR
IIKAEFLKDMKFGDGYAVEHFIALQLAKKGAKIVEEYVSVEYHDEAVSYITTKKILEVAKQVIKFIFLE
>Mature_229_residues
MIAIIPAFNEEKNILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKINVYLIRNEKNEGKAKAIEKGTKFALSLN
KYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADAVFGIRKYKHIPLHRQISNFFASILTSLAVLIYSKRFYFFRDVQCGFR
IIKAEFLKDMKFGDGYAVEHFIALQLAKKGAKIVEEYVSVEYHDEAVSYITTKKILEVAKQVIKFIFLE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y544_METJA (Q57964)

Other databases:

- EMBL:   L77117
- PIR:   H64367
- RefSeq:   NP_247523.1
- ProteinModelPortal:   Q57964
- GeneID:   1451409
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0544
- NMPDR:   fig|243232.1.peg.560
- TIGR:   MJ0544
- HOGENOM:   HBG752660
- OMA:   SYITTKK
- ProtClustDB:   CLSK876239
- BioCyc:   MJAN243232:MJ_0544-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.4.1.83

Molecular weight: Translated: 26470; Mature: 26470

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIIPAFNEEKNILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKINVYLIRNE
CEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECC
KNEGKAKAIEKGTKFALSLNKYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADAVFGIRKY
CCCCHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHH
KHIPLHRQISNFFASILTSLAVLIYSKRFYFFRDVQCGFRIIKAEFLKDMKFGDGYAVEH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
FIALQLAKKGAKIVEEYVSVEYHDEAVSYITTKKILEVAKQVIKFIFLE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAIIPAFNEEKNILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKINVYLIRNE
CEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECC
KNEGKAKAIEKGTKFALSLNKYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADAVFGIRKY
CCCCHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHH
KHIPLHRQISNFFASILTSLAVLIYSKRFYFFRDVQCGFRIIKAEFLKDMKFGDGYAVEH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
FIALQLAKKGAKIVEEYVSVEYHDEAVSYITTKKILEVAKQVIKFIFLE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087