Click here to switch to the map view.

The map label for this gene is korC

Identifier: 15668716

GI number: 15668716

Start: 472377

End: 472940

Strand: Reverse

Name: korC

Synonym: MJ0536

Alternate gene names: 15668716

Gene position: 472940-472377 (Counterclockwise)

Preceding gene: 15668717

Following gene: 15668715

Centisome position: 28.41

GC content: 37.06

Gene sequence:

>564_bases
GTGAATAAAAGGAGGGTTAAGATGAGAAAAGAGATAAGACTCTCTGGATTTGGTGGGCAGGGAATTATTTTGGCTGGAGT
TATTTTAGGGAGGGCAGCAGCATTGTATGACAATAAAGAGGCAGTTCAAACACAGTCTTATGGGCCGGAAGCAAGAGGGG
GGGCAAGTAAGTCAGAGGTTGTTATCAGTGATGAGCCAATTGACTTCCCAAAGGTTATAAAGCCGGATATATTGGTTTGT
TTATCACAGCAGGCTTATGATAAGTATAAGGATGATATTAAAGAGGGAGGAGTTGTATTGGTTGATGAGGATTTAGTTTC
AACAGATAAAATGCCAGAAGTTGATGTAACGATGTATAAAATCCCATTTACAAGGATTGCATCAGAGGAGATAAAACTTC
CAATTGTTGCAAATATAGTTATGTTAGGAGCTTTAACAAGATTAACAAATATTGTTTCAAAGGAAAGTATGGAAAAGGCA
ATTTTAGATAGTGTTCCAAAGGGAACTGAAGAGAAAAACTTATTGGCATTTAGTAAGGGATATGAAGTTGCAAAGGAGTT
ATAA

Upstream 100 bases:

>100_bases
GAAGAGGAGTTGAATGGAAAAATTGTTGTTGGTGAGTTTTTAGATATAGAGAAACCAGAGTTTGTTGAGGAATTGCATAA
GTTGATTGAGAAGTTAAAGA

Downstream 100 bases:

>100_bases
AGAAGAGGCATTGCTTCTGTAAAGAAGCAATGCATCCAGGTATCCCAATAGGGCGAAGCCCTATGGTTAGTAAGGGTTAT
GAAGTTGCTGGAAAATTGTA

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit gamma

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase gamma chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit gamma

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNKRRVKMRKEIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEVVISDEPIDFPKVIKPDILVC
LSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYKIPFTRIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKA
ILDSVPKGTEEKNLLAFSKGYEVAKEL

Sequences:

>Translated_187_residues
MNKRRVKMRKEIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEVVISDEPIDFPKVIKPDILVC
LSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYKIPFTRIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKA
ILDSVPKGTEEKNLLAFSKGYEVAKEL
>Mature_187_residues
MNKRRVKMRKEIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEVVISDEPIDFPKVIKPDILVC
LSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYKIPFTRIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKA
ILDSVPKGTEEKNLLAFSKGYEVAKEL

Specific function: Unknown

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KORC_METJA (Q57956)

Other databases:

- EMBL:   L77117
- PIR:   H64366
- RefSeq:   NP_247515.1
- ProteinModelPortal:   Q57956
- SMR:   Q57956
- GeneID:   1451401
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0536
- NMPDR:   fig|243232.1.peg.552
- TIGR:   MJ0536
- HOGENOM:   HBG553299
- OMA:   ITQSVVA
- ProtClustDB:   PRK08537
- BioCyc:   MJAN243232:MJ_0536-MONOMER
- BRENDA:   1.2.7.3
- InterPro:   IPR011894
- InterPro:   IPR019752
- InterPro:   IPR002869
- Gene3D:   G3DSA:3.40.920.10
- TIGRFAMs:   TIGR02175

Pfam domain/function: PF01558 POR; SSF53323 Pyrv_Fd/Flavodoxin_OxRdtase

EC number: =1.2.7.3

Molecular weight: Translated: 20548; Mature: 20548

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRRVKMRKEIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEV
CCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEE
VISDEPIDFPKVIKPDILVCLSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYK
EECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEEEECCHHCCCCCCCCCEEEEE
IPFTRIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKAILDSVPKGTEEKNLLAFSKG
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHC
YEVAKEL
HHHHHCC
>Mature Secondary Structure
MNKRRVKMRKEIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEV
CCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEE
VISDEPIDFPKVIKPDILVCLSQQAYDKYKDDIKEGGVVLVDEDLVSTDKMPEVDVTMYK
EECCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEEEECCHHCCCCCCCCCEEEEE
IPFTRIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKAILDSVPKGTEEKNLLAFSKG
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHC
YEVAKEL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087