Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668706

Identifier: 15668706

GI number: 15668706

Start: 464406

End: 464654

Strand: Reverse

Name: 15668706

Synonym: MJ0526.1

Alternate gene names: NA

Gene position: 464654-464406 (Counterclockwise)

Preceding gene: 15668707

Following gene: 15668705

Centisome position: 27.91

GC content: 32.13

Gene sequence:

>249_bases
ATGATGGATATTGTAGAGATAATTATTGGATTTATAGCATTGTTAATGACAGCAAGGATATTCTTAGAAAGAAGTAGAGC
AAGAAAATTGCTTTACCTTTGTTGTTTAAGCTTCTGTATCTCTGCATTAATTGCTCTATATGTGGATTCACCAATGGGAG
GTATAGTGGCTATAACATACTTTATATGCTCAACTATCTCATCCAATGCAATTGCCTATACAATAGAGCAAACAAAACAT
ATTGAATAG

Upstream 100 bases:

>100_bases
TTGTGGGAATGGTCTTGGCAATATTTACAATTCAAGGATTTGAGCACAGATATGCCTCTATATTACTTGGAAAAATAGCT
AAAAAGATGAATAGAGGGGA

Downstream 100 bases:

>100_bases
GTGAAAATTTGGAGGTTTTACCATTAGTATCTGGAATATGTTGCATATTGGGAGGAATTGGAGTTATCTTACATACAAAT
CCAATAAACAAAATTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH
IE

Sequences:

>Translated_82_residues
MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH
IE
>Mature_82_residues
MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH
IE

Specific function: Unknown

COG id: COG4040

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH386

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y52A_METJA (P81309)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247505.1
- GeneID:   1451391
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0526.1
- NMPDR:   fig|243232.1.peg.542
- TIGR:   MJ0526.1
- HOGENOM:   HBG546207
- OMA:   CINFCIA
- ProtClustDB:   CLSK876229
- BioCyc:   MJAN243232:MJ_0526.1-MONOMER
- InterPro:   IPR019214
- InterPro:   IPR011316
- PIRSF:   PIRSF036534

Pfam domain/function: PF09882 DUF2109

EC number: NA

Molecular weight: Translated: 9169; Mature: 9169

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FICSTISSNAIAYTIEQTKHIE
HHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FICSTISSNAIAYTIEQTKHIE
HHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087