Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668696
Identifier: 15668696
GI number: 15668696
Start: 459317
End: 459739
Strand: Reverse
Name: 15668696
Synonym: MJ0517
Alternate gene names: NA
Gene position: 459739-459317 (Counterclockwise)
Preceding gene: 15668697
Following gene: 15668695
Centisome position: 27.61
GC content: 31.91
Gene sequence:
>423_bases GTGGTAATTATGACTGAGATTGTTGATATTGACAAAAAATATGTTGAGAATTCATTAAAACAGAAGATGAATGTTCTTAA GGATAATAGATTTTTAATGGATGATGTATTTATTCCAATAGCTAAAGCTTTAAAGATAGAGGTTGAGGAAGTTATTGAAA TATTTGCAAAAAAATTGGATTTTGCATCTTGTTATGAACTCCATGCTTATGCAGAGCAGGCAAAGATGGGCTGTTTAGGA AGGAAGGTAGATATTGATTTAGGGCTGTGCTGGCTTAGTGATTTCTTTGGACTTATAAAAAAAGAAGAAGCAGATTTAAT TAGAAAAAAGGTAGTTGAAAGTTATTTGCTGTATAAAAAGCCATATAAAGAGGCGTTGGAGGAAGGTAGGCAGATGATTA TCAAATTGTTAAAGGAGGAATAG
Upstream 100 bases:
>100_bases GATGTCTATTAATTGGATTTCCTTTAGGTATGAGACCTGGATATGGAAGAGTTGAATTTGTTGTTGGATTAGCAGTTGCC CTGTTTCTTTATTTCTTGAG
Downstream 100 bases:
>100_bases CCATGATGAAAGAATTATTCAGAAACCATAGGGCTTCGCCCTATTGGGATACCCAGGATGCATTGCTTCTGCAAAGAAGC AATGCCTCTTAAAATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVIMTEIVDIDKKYVENSLKQKMNVLKDNRFLMDDVFIPIAKALKIEVEEVIEIFAKKLDFASCYELHAYAEQAKMGCLG RKVDIDLGLCWLSDFFGLIKKEEADLIRKKVVESYLLYKKPYKEALEEGRQMIIKLLKEE
Sequences:
>Translated_140_residues MVIMTEIVDIDKKYVENSLKQKMNVLKDNRFLMDDVFIPIAKALKIEVEEVIEIFAKKLDFASCYELHAYAEQAKMGCLG RKVDIDLGLCWLSDFFGLIKKEEADLIRKKVVESYLLYKKPYKEALEEGRQMIIKLLKEE >Mature_140_residues MVIMTEIVDIDKKYVENSLKQKMNVLKDNRFLMDDVFIPIAKALKIEVEEVIEIFAKKLDFASCYELHAYAEQAKMGCLG RKVDIDLGLCWLSDFFGLIKKEEADLIRKKVVESYLLYKKPYKEALEEGRQMIIKLLKEE
Specific function: Unknown
COG id: COG4084
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y517_METJA (Q57937)
Other databases:
- EMBL: L77117 - PIR: E64364 - RefSeq: NP_247495.1 - ProteinModelPortal: Q57937 - SMR: Q57937 - GeneID: 1451381 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0517 - NMPDR: fig|243232.1.peg.532 - TIGR: MJ0517 - HOGENOM: HBG539072 - OMA: IDLGLCW - ProtClustDB: CLSK876219 - BioCyc: MJAN243232:MJ_0517-MONOMER - InterPro: IPR012056 - Gene3D: G3DSA:1.10.3070.10
Pfam domain/function: PF09218 DUF1959; SSF101332 NiFe_hyd_3_EhaM
EC number: NA
Molecular weight: Translated: 16387; Mature: 16387
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIMTEIVDIDKKYVENSLKQKMNVLKDNRFLMDDVFIPIAKALKIEVEEVIEIFAKKLD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FASCYELHAYAEQAKMGCLGRKVDIDLGLCWLSDFFGLIKKEEADLIRKKVVESYLLYKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PYKEALEEGRQMIIKLLKEE HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVIMTEIVDIDKKYVENSLKQKMNVLKDNRFLMDDVFIPIAKALKIEVEEVIEIFAKKLD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FASCYELHAYAEQAKMGCLGRKVDIDLGLCWLSDFFGLIKKEEADLIRKKVVESYLLYKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PYKEALEEGRQMIIKLLKEE HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087