Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668677
Identifier: 15668677
GI number: 15668677
Start: 441533
End: 442312
Strand: Reverse
Name: 15668677
Synonym: MJ0500
Alternate gene names: NA
Gene position: 442312-441533 (Counterclockwise)
Preceding gene: 15668678
Following gene: 15668676
Centisome position: 26.57
GC content: 32.56
Gene sequence:
>780_bases GTGAGTTTTATGATAATAGAAGAGATAAAAGAGAGAGCTTTAAATCTGCTAAGTGAGAAAGAAGAAGATTTTAAAGTTAT TGATTTCTCCTTTGCCTTGCCTTATAGCTATGTATTAATTGAAAGCAATGGCAAAAAAGCTTTGGGAGTGGCAATGACGT TATTGGAGGAATATAGAGGGCATGGAAATAGGAAAGATTTAAATATAAATAAAAATTTGGAAGAGTTTATAAACATGGCA GATAGTTTTGATATTGTTGAAAGAACTTTGGGAGTTGCAGCTATCAATGCAGTATCTCAATACTATTTTAACTTTGAAGC TAATGGAAAAGATGCCGCTGAGTTAGTTTTAAATAGAGACGATATTAAAAAAATAGCTTTCGTTGGAAATATGATTCCAG TTGTTAATATGCTGAAAAAATCTGAAAAATTTGATATCTATGTGTTTGAGAGAAGTCCTTCACTATTGATGGATGGAGTT TTAAGCGATGCCTTTGAATATAGGTTATTGCCAGAGATGGATGCCGTATTTATCAGCGGAACTACTCTGCTAAATGATAC ATTGGATTTTGTTTTAGATAGGGCTAAAAATGCCAAGTTAAAGATTTTAGTAGGACCTACAGCTCAATCTTTGCCAGAGC TATTTAAAGGATTTGGCATAACACATATAGCATCAACAAAGATTATAGATGTTGATAAAGCTCTCCTATATTTAAAATTT GCCTCTTCTTCAATGCTATTCAAGGGAGCATCAAAGAAATACACTATGGAGGTAGAATAA
Upstream 100 bases:
>100_bases AATATAATTTAATGCTGTTTTGATGATGTTAATTCTTTATAATGAATAAAATCTTAAATGTAATTAAAATTTTAAAATTA ATAATCGCCAAATATCTGAA
Downstream 100 bases:
>100_bases AAATATATAGTTTTTGCAAAAGTTATTAAATTGACTAAGGAAAGTTGAACACCTTCTTATAGAAGGCGTTCATTATATAC CTTATTATTACAAAATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSFMIIEEIKERALNLLSEKEEDFKVIDFSFALPYSYVLIESNGKKALGVAMTLLEEYRGHGNRKDLNINKNLEEFINMA DSFDIVERTLGVAAINAVSQYYFNFEANGKDAAELVLNRDDIKKIAFVGNMIPVVNMLKKSEKFDIYVFERSPSLLMDGV LSDAFEYRLLPEMDAVFISGTTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFKGFGITHIASTKIIDVDKALLYLKF ASSSMLFKGASKKYTMEVE
Sequences:
>Translated_259_residues MSFMIIEEIKERALNLLSEKEEDFKVIDFSFALPYSYVLIESNGKKALGVAMTLLEEYRGHGNRKDLNINKNLEEFINMA DSFDIVERTLGVAAINAVSQYYFNFEANGKDAAELVLNRDDIKKIAFVGNMIPVVNMLKKSEKFDIYVFERSPSLLMDGV LSDAFEYRLLPEMDAVFISGTTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFKGFGITHIASTKIIDVDKALLYLKF ASSSMLFKGASKKYTMEVE >Mature_258_residues SFMIIEEIKERALNLLSEKEEDFKVIDFSFALPYSYVLIESNGKKALGVAMTLLEEYRGHGNRKDLNINKNLEEFINMAD SFDIVERTLGVAAINAVSQYYFNFEANGKDAAELVLNRDDIKKIAFVGNMIPVVNMLKKSEKFDIYVFERSPSLLMDGVL SDAFEYRLLPEMDAVFISGTTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFKGFGITHIASTKIIDVDKALLYLKFA SSSMLFKGASKKYTMEVE
Specific function: Unknown
COG id: COG2014
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y500_METJA (Q57923)
Other databases:
- EMBL: L77117 - PIR: D64362 - RefSeq: NP_247476.1 - ProteinModelPortal: Q57923 - SMR: Q57923 - GeneID: 1451362 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0500 - NMPDR: fig|243232.1.peg.513 - TIGR: MJ0500 - HOGENOM: HBG539068 - OMA: PKLWDRE - ProtClustDB: CLSK689512 - BioCyc: MJAN243232:MJ_0500-MONOMER - InterPro: IPR007161
Pfam domain/function: PF04016 DUF364
EC number: NA
Molecular weight: Translated: 29193; Mature: 29062
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMIIEEIKERALNLLSEKEEDFKVIDFSFALPYSYVLIESNGKKALGVAMTLLEEYRG CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHC HGNRKDLNINKNLEEFINMADSFDIVERTLGVAAINAVSQYYFNFEANGKDAAELVLNRD CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCHH DIKKIAFVGNMIPVVNMLKKSEKFDIYVFERSPSLLMDGVLSDAFEYRLLPEMDAVFISG HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCEEEEEC TTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFKGFGITHIASTKIIDVDKALLYLKF CHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCEEEEHHHHEEEEEE ASSSMLFKGASKKYTMEVE CCCCEEEECCCCCEEEEEC >Mature Secondary Structure SFMIIEEIKERALNLLSEKEEDFKVIDFSFALPYSYVLIESNGKKALGVAMTLLEEYRG CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHC HGNRKDLNINKNLEEFINMADSFDIVERTLGVAAINAVSQYYFNFEANGKDAAELVLNRD CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCHH DIKKIAFVGNMIPVVNMLKKSEKFDIYVFERSPSLLMDGVLSDAFEYRLLPEMDAVFISG HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCEEEEEC TTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFKGFGITHIASTKIIDVDKALLYLKF CHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCEEEEHHHHEEEEEE ASSSMLFKGASKKYTMEVE CCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087