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The map label for this gene is yhcC [C]

Identifier: 15668663

GI number: 15668663

Start: 429676

End: 430644

Strand: Reverse

Name: yhcC [C]

Synonym: MJ0486

Alternate gene names: 15668663

Gene position: 430644-429676 (Counterclockwise)

Preceding gene: 15668669

Following gene: 15668660

Centisome position: 25.86

GC content: 31.37

Gene sequence:

>969_bases
TTGGTGGTTATTATGCTTAATTACGATGATATTAAAATAATTGATGAAATTTATAGTGAGGGTTATTTATTTGCTCAATA
TGGCATTTATATAAAGAAAAAATTTAAACAGAAAATTTTCAAAATTCCTGTTGATATTGGACTTGGATGTCCTCACAAAA
AAAATGGTGGATGTATCTTCTGCCCAGAGATGGGAAGACCAATATCCGTCAAATACTGCAGTGCAAAAATTCCATTAAAA
GAGCAAATTAAAAAACAGATGGAAAATCAGAAAAAGAAAGGATTTAAAAAATTCTATATATATTTTTATCCTGGGACTAA
CACTTATGCTCCAGCAGAGAAATTAAAAGAAATTTGGGATTTTTCCCTATCTTATAAAGAGGTAATTGGCTTATCAATAG
GAACAAGACCTGATTGCTTAGAAAAAGAGAAATTGGATATTTTAGCTGAATATGTTGAGAATGGCTATGACATTTGGATT
GATTTGGGAGTTCAAAGTATGCATCAAAAGACATTGGAGATTTTAAATAGAGGGCATGATGTTTCAGATATTATAAAAGC
AATAAAGGACTGCCATAAAAGAGGAATAAAGGTCTGTGGGCATGTGATTTTGGGTCTTCCTGGAGAGAGTTGGAAAGAGA
TGATGGAGACAGCAAAAATTTTATCTCTGTTAGAGATTGAAGCAGTTAAGATATATCCCTTAGTTGTTGTTAAAGGGACA
AAATTAGAGGAGATGTATTGGAAAGGAGAATATAGGACATTAGATGAAAATCAGTATATAAGCTTAGTTTGTGATTTTTT
AGAACATCTCTCTCCTTATGTGTTAATTCAAAGATTGTCTAAGGATAAAGTTCCTGAAAGTATTAAGGTGTCTCCAGAAT
GGTATTTAGGTAGATTGAAGATTATGAATAAAGTGAGTGAGATATTGAAAAAAAGAGGAACTAAGCAAGGAGCAAGATTT
TTTAGATAA

Upstream 100 bases:

>100_bases
AATGGCAATCTTTGAATAGGACTTCGCAGTTTGATATATCCAATAATGAACTTTAATAATCTCAATTAATAAAAATTTAT
TTTAGTAGTTAATATTTAAT

Downstream 100 bases:

>100_bases
TCTTTTTTATTAATAACTATTTTGTACTAAAAAGAGCATAATTTATTCTCTAAGAGATATGATTTTAATCAAGTGCTTAT
TATTTGTTAAAAGGTGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVVIMLNYDDIKIIDEIYSEGYLFAQYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIFCPEMGRPISVKYCSAKIPLK
EQIKKQMENQKKKGFKKFYIYFYPGTNTYAPAEKLKEIWDFSLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGYDIWI
DLGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKILSLLEIEAVKIYPLVVVKGT
KLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLKIMNKVSEILKKRGTKQGARF
FR

Sequences:

>Translated_322_residues
MVVIMLNYDDIKIIDEIYSEGYLFAQYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIFCPEMGRPISVKYCSAKIPLK
EQIKKQMENQKKKGFKKFYIYFYPGTNTYAPAEKLKEIWDFSLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGYDIWI
DLGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKILSLLEIEAVKIYPLVVVKGT
KLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLKIMNKVSEILKKRGTKQGARF
FR
>Mature_322_residues
MVVIMLNYDDIKIIDEIYSEGYLFAQYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIFCPEMGRPISVKYCSAKIPLK
EQIKKQMENQKKKGFKKFYIYFYPGTNTYAPAEKLKEIWDFSLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGYDIWI
DLGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKILSLLEIEAVKIYPLVVVKGT
KLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLKIMNKVSEILKKRGTKQGARF
FR

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcC

Homologues:

Organism=Homo sapiens, GI23510283, Length=167, Percent_Identity=26.9461077844311, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI2367204, Length=302, Percent_Identity=28.8079470198675, Blast_Score=171, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI133955098, Length=160, Percent_Identity=28.75, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325171, Length=347, Percent_Identity=22.7665706051873, Blast_Score=82, Evalue=9e-17,
Organism=Drosophila melanogaster, GI19920684, Length=167, Percent_Identity=28.1437125748503, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y486_METJA (Q57910)

Other databases:

- EMBL:   L77117
- PIR:   F64360
- RefSeq:   NP_247462.1
- ProteinModelPortal:   Q57910
- GeneID:   1451348
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0486
- NMPDR:   fig|243232.1.peg.499
- TIGR:   MJ0486
- HOGENOM:   HBG359185
- OMA:   HVILGLP
- ProtClustDB:   CLSK2300407
- BioCyc:   MJAN243232:MJ_0486-MONOMER
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197
- SMART:   SM00729
- TIGRFAMs:   TIGR01212

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 37391; Mature: 37391

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVIMLNYDDIKIIDEIYSEGYLFAQYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIF
CEEEEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
CPEMGRPISVKYCSAKIPLKEQIKKQMENQKKKGFKKFYIYFYPGTNTYAPAEKLKEIWD
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHC
FSLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGYDIWIDLGVQSMHQKTLEILNRGHD
CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCC
VSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKILSLLEIEAVKIYPLVVVKGT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
KLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLK
CHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH
IMNKVSEILKKRGTKQGARFFR
HHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MVVIMLNYDDIKIIDEIYSEGYLFAQYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIF
CEEEEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
CPEMGRPISVKYCSAKIPLKEQIKKQMENQKKKGFKKFYIYFYPGTNTYAPAEKLKEIWD
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHC
FSLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGYDIWIDLGVQSMHQKTLEILNRGHD
CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCC
VSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKILSLLEIEAVKIYPLVVVKGT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
KLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSKDKVPESIKVSPEWYLGRLK
CHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHH
IMNKVSEILKKRGTKQGARFFR
HHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087