Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668658
Identifier: 15668658
GI number: 15668658
Start: 423068
End: 423790
Strand: Reverse
Name: 15668658
Synonym: MJ0482
Alternate gene names: NA
Gene position: 423790-423068 (Counterclockwise)
Preceding gene: 15668660
Following gene: 15668631
Centisome position: 25.45
GC content: 30.29
Gene sequence:
>723_bases ATGAAATCACCTCATAAAGTTATTTATTGTTATTTAATTATATTATATAAATTATCATCTTGCCACATATATTATAAATA TATTCCGTTTCGGTTAACAGTGTTAGTTAATTATTTTTTATTACTCAATGTTGGTGAAATTATGTGGAAGAAATTGGAAA GCTTAACAAGTAAAATTTATGAAAAGGCGAGAAAAAGAAAGGGGGAGCATAGAATTGCATTGTTAATTGATGGACCAAAC ATGCTTAGAAAAGAATTTAACATTGATTTAGATAAAATTAGAGAGGTTTTAAGTGAATTTGGCGATATTGTTATTGGCAG GGTTTATTTGAACCAATATGCATCAGATAAATTAATAGAGGCCGTTATAAACCAAGGTTTTGAACCAAAGATATCTGCTG GAGATGTGGATGTTGAAATGGCTGTAGATGCCACTGAGCTCGTGTTTAATCCAAATATTGACACCATTGCCTATGTAACA AGAGATGCTGACTTTCTTCCAGCAATTAGAAAGGCAAAAGAAAGGGGAAAAAAGGTTATAGTTATTGGAGCTGAGCCTGG TTTTTCAACGGCTTTACAGAATATTGCTGATTATGTAATTAAAATTGGAGAGGAATTCCAATTAGATAGAGAAAAATTAG AGAAAAAGAAGAAAAATAAATTTTTAAAAGTTGAGGAAAAACAGAAAGATAAAGAAGAAACTGAAAATAGAGAAGAACCT TAA
Upstream 100 bases:
>100_bases CCCTTTATTTTGATATTTAAAGAATTTTTCAACCATCTTTAAGTAAATATTAACTGCAGCTTCATTTACACAATCTTTTC CACAGTATGGACAATTATAC
Downstream 100 bases:
>100_bases TCATTTATTTTATTCCAAGTATCTTTCTCAATACAGTAGATGTTGCGAATGAACAGAGAATATACCAACCTAACCAACCT AAGGCAGTGTTAGAAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKSPHKVIYCYLIILYKLSSCHIYYKYIPFRLTVLVNYFLLLNVGEIMWKKLESLTSKIYEKARKRKGEHRIALLIDGPN MLRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASDKLIEAVINQGFEPKISAGDVDVEMAVDATELVFNPNIDTIAYVT RDADFLPAIRKAKERGKKVIVIGAEPGFSTALQNIADYVIKIGEEFQLDREKLEKKKKNKFLKVEEKQKDKEETENREEP
Sequences:
>Translated_240_residues MKSPHKVIYCYLIILYKLSSCHIYYKYIPFRLTVLVNYFLLLNVGEIMWKKLESLTSKIYEKARKRKGEHRIALLIDGPN MLRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASDKLIEAVINQGFEPKISAGDVDVEMAVDATELVFNPNIDTIAYVT RDADFLPAIRKAKERGKKVIVIGAEPGFSTALQNIADYVIKIGEEFQLDREKLEKKKKNKFLKVEEKQKDKEETENREEP >Mature_240_residues MKSPHKVIYCYLIILYKLSSCHIYYKYIPFRLTVLVNYFLLLNVGEIMWKKLESLTSKIYEKARKRKGEHRIALLIDGPN MLRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASDKLIEAVINQGFEPKISAGDVDVEMAVDATELVFNPNIDTIAYVT RDADFLPAIRKAKERGKKVIVIGAEPGFSTALQNIADYVIKIGEEFQLDREKLEKKKKNKFLKVEEKQKDKEETENREEP
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y482_METJA (Q57905)
Other databases:
- EMBL: L77117 - PIR: A64360 - RefSeq: NP_247457.1 - ProteinModelPortal: Q57905 - SMR: Q57905 - GeneID: 1451343 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0482 - NMPDR: fig|243232.1.peg.494 - TIGR: MJ0482 - HOGENOM: HBG496929 - OMA: KFLKVEE - ProtClustDB: CLSK2749885 - BioCyc: MJAN243232:MJ_0482-MONOMER - InterPro: IPR002790 - InterPro: IPR021139 - TIGRFAMs: TIGR00288
Pfam domain/function: PF01936 DUF88
EC number: NA
Molecular weight: Translated: 27869; Mature: 27869
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPHKVIYCYLIILYKLSSCHIYYKYIPFRLTVLVNYFLLLNVGEIMWKKLESLTSKIY CCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKARKRKGEHRIALLIDGPNMLRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASDKLIE HHHHHCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVINQGFEPKISAGDVDVEMAVDATELVFNPNIDTIAYVTRDADFLPAIRKAKERGKKVI HHHCCCCCCCCCCCCCEEEEEECHHHEEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEE VIGAEPGFSTALQNIADYVIKIGEEFQLDREKLEKKKKNKFLKVEEKQKDKEETENREEP EEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSPHKVIYCYLIILYKLSSCHIYYKYIPFRLTVLVNYFLLLNVGEIMWKKLESLTSKIY CCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKARKRKGEHRIALLIDGPNMLRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASDKLIE HHHHHCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVINQGFEPKISAGDVDVEMAVDATELVFNPNIDTIAYVTRDADFLPAIRKAKERGKKVI HHHCCCCCCCCCCCCCEEEEEECHHHEEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEE VIGAEPGFSTALQNIADYVIKIGEEFQLDREKLEKKKKNKFLKVEEKQKDKEETENREEP EEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087