Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668615
Identifier: 15668615
GI number: 15668615
Start: 393228
End: 394313
Strand: Reverse
Name: 15668615
Synonym: MJ0439
Alternate gene names: NA
Gene position: 394313-393228 (Counterclockwise)
Preceding gene: 15668618
Following gene: 15668613
Centisome position: 23.68
GC content: 25.41
Gene sequence:
>1086_bases TTGAATTATATTTATAGTTTTATTAATGGTGATTTTATGAGATTTTTTAATAGAGAAAAGGAAATAACTGAAATTTTGTC AATTTTAGAGGGAAATCCGGATTTAGTTTATTTTGTTTATGGTCCATTAAATTCAGGTAAAACTGCACTAATTAGCGAAA TAATTAACAATAGGATAGATAAGAATAAGTATGTTGTATTTTATATAAACCTTAGAGGTATTTTTATCTCTAAATATAAA GATTTTATTGAAGTATTATTTGAAGAGTATGAAGAAGATAGAAAGCCAGTAGAAATTATAAAGAGTTTGATAAAGGACGT TCCTTCTTTATGTGGTATTCCAACACCAAAAAATACATTAGAAGAAATCTTGAAGAAAAAGACAACTAAAAATGTCTTTA AATACATAACTAACGTATTAATGGATATTAAAAAAGAAGGAAAGCAACCAATAATTATTATTGATGAGTTACAAAAGATT GGTGATATGAAGATTAATGGATTCTTAATTTATGAGCTTTTTAATTATTTTGTTGATTTAACTAAAGAATTGCATTTATG TCATGTTTTTTGCCTAAGTTCGGATAGCTTATTTATTGAACAAGTTTATAGTGAAGCAATGTTAAAGGATAGAGTAGATT ACATCTTAGTGGATGATTTTGATAAAGAGACAGCTTTAAAGTTTATGGATTTCTTAGCTGAGGAAATTCTAAATAAAAAA CTATCTGATGATGAGAAAGAGCTTATCTATAGCTATGTAGGGGGAAAGCCAATTTTGATAATAAAAGTAATTAAAAAATT GAAAATTAAAGGTTTAAAAGAAACTTTAGATGAAATGCTTAGGGATGAAATGCAAAAACTAAAATACTTCTTAGAGGACA TTAAGGAGAAGGACGAAGAGTCTTATAACAAAATAGCTGATGCATTAGAGATATTTAAAGATAGTTATGAAATTGAAGAT ATAAAAATACCTAAGAATATTAGAGAATTTTTAGTTAAGAAAAATATTTTATTCTTAAATCCACAAAAAGGAACATTGAA ACCCCAAAGTTATTTGGTTTGGAATGCTATAAAGAGATTATTATAA
Upstream 100 bases:
>100_bases CAGAACTAACTTATAATACAAAAATTTTAAAAATTATTGAAGAGAAGTTTTTATAAGAAATCGATTGAAGCTGAAATTTT AGTAGAGGTTTTACTTTACC
Downstream 100 bases:
>100_bases AGTTAAATAAAACACCCTTGTCATCAAACCACCAAACATGACATTGAACTCCTCCTTAACCTCAAAGTTATTTTTTGCTA TAGCATCTTTAAACATCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL
Sequences:
>Translated_361_residues MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL >Mature_361_residues MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal ATPase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y439_METJA (Q57881)
Other databases:
- EMBL: L77117 - PIR: G64354 - RefSeq: NP_247413.1 - ProteinModelPortal: Q57881 - SMR: Q57881 - GeneID: 1451299 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0439 - NMPDR: fig|243232.1.peg.450 - TIGR: MJ0439 - HOGENOM: HBG538932 - OMA: REKEMEY - ProtClustDB: CLSK539704 - BioCyc: MJAN243232:MJ_0439-MONOMER - InterPro: IPR003593 - InterPro: IPR011579 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382
Pfam domain/function: PF01637 Arch_ATPase
EC number: NA
Molecular weight: Translated: 42610; Mature: 42610
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRID CCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC KNKYVVFYINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTL CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH EEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHH TKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYNKIADALEIFKDSYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRL HHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH L C >Mature Secondary Structure MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRID CCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC KNKYVVFYINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTL CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH EEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHH TKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYNKIADALEIFKDSYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRL HHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9045616