Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668615

Identifier: 15668615

GI number: 15668615

Start: 393228

End: 394313

Strand: Reverse

Name: 15668615

Synonym: MJ0439

Alternate gene names: NA

Gene position: 394313-393228 (Counterclockwise)

Preceding gene: 15668618

Following gene: 15668613

Centisome position: 23.68

GC content: 25.41

Gene sequence:

>1086_bases
TTGAATTATATTTATAGTTTTATTAATGGTGATTTTATGAGATTTTTTAATAGAGAAAAGGAAATAACTGAAATTTTGTC
AATTTTAGAGGGAAATCCGGATTTAGTTTATTTTGTTTATGGTCCATTAAATTCAGGTAAAACTGCACTAATTAGCGAAA
TAATTAACAATAGGATAGATAAGAATAAGTATGTTGTATTTTATATAAACCTTAGAGGTATTTTTATCTCTAAATATAAA
GATTTTATTGAAGTATTATTTGAAGAGTATGAAGAAGATAGAAAGCCAGTAGAAATTATAAAGAGTTTGATAAAGGACGT
TCCTTCTTTATGTGGTATTCCAACACCAAAAAATACATTAGAAGAAATCTTGAAGAAAAAGACAACTAAAAATGTCTTTA
AATACATAACTAACGTATTAATGGATATTAAAAAAGAAGGAAAGCAACCAATAATTATTATTGATGAGTTACAAAAGATT
GGTGATATGAAGATTAATGGATTCTTAATTTATGAGCTTTTTAATTATTTTGTTGATTTAACTAAAGAATTGCATTTATG
TCATGTTTTTTGCCTAAGTTCGGATAGCTTATTTATTGAACAAGTTTATAGTGAAGCAATGTTAAAGGATAGAGTAGATT
ACATCTTAGTGGATGATTTTGATAAAGAGACAGCTTTAAAGTTTATGGATTTCTTAGCTGAGGAAATTCTAAATAAAAAA
CTATCTGATGATGAGAAAGAGCTTATCTATAGCTATGTAGGGGGAAAGCCAATTTTGATAATAAAAGTAATTAAAAAATT
GAAAATTAAAGGTTTAAAAGAAACTTTAGATGAAATGCTTAGGGATGAAATGCAAAAACTAAAATACTTCTTAGAGGACA
TTAAGGAGAAGGACGAAGAGTCTTATAACAAAATAGCTGATGCATTAGAGATATTTAAAGATAGTTATGAAATTGAAGAT
ATAAAAATACCTAAGAATATTAGAGAATTTTTAGTTAAGAAAAATATTTTATTCTTAAATCCACAAAAAGGAACATTGAA
ACCCCAAAGTTATTTGGTTTGGAATGCTATAAAGAGATTATTATAA

Upstream 100 bases:

>100_bases
CAGAACTAACTTATAATACAAAAATTTTAAAAATTATTGAAGAGAAGTTTTTATAAGAAATCGATTGAAGCTGAAATTTT
AGTAGAGGTTTTACTTTACC

Downstream 100 bases:

>100_bases
AGTTAAATAAAACACCCTTGTCATCAAACCACCAAACATGACATTGAACTCCTCCTTAACCTCAAAGTTATTTTTTGCTA
TAGCATCTTTAAACATCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK
DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI
GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK
LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED
IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL

Sequences:

>Translated_361_residues
MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK
DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI
GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK
LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED
IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL
>Mature_361_residues
MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGIFISKYK
DFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKI
GDMKINGFLIYELFNYFVDLTKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK
LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNKIADALEIFKDSYEIED
IKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL

Specific function: Unknown

COG id: COG1672

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal ATPase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y439_METJA (Q57881)

Other databases:

- EMBL:   L77117
- PIR:   G64354
- RefSeq:   NP_247413.1
- ProteinModelPortal:   Q57881
- SMR:   Q57881
- GeneID:   1451299
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0439
- NMPDR:   fig|243232.1.peg.450
- TIGR:   MJ0439
- HOGENOM:   HBG538932
- OMA:   REKEMEY
- ProtClustDB:   CLSK539704
- BioCyc:   MJAN243232:MJ_0439-MONOMER
- InterPro:   IPR003593
- InterPro:   IPR011579
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00382

Pfam domain/function: PF01637 Arch_ATPase

EC number: NA

Molecular weight: Translated: 42610; Mature: 42610

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRID
CCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
KNKYVVFYINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTL
CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
EEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHH
TKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYNKIADALEIFKDSYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRL
HHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH
L
C
>Mature Secondary Structure
MNYIYSFINGDFMRFFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRID
CCCCHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
KNKYVVFYINLRGIFISKYKDFIEVLFEEYEEDRKPVEIIKSLIKDVPSLCGIPTPKNTL
CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
EEILKKKTTKNVFKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHH
TKELHLCHVFCLSSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LSDDEKELIYSYVGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEE
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYNKIADALEIFKDSYEIEDIKIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRL
HHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHH
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9045616