Definition | Helicobacter pylori 26695, complete genome. |
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Accession | NC_000915 |
Length | 1,667,867 |
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Identifier: 15645734
GI number: 15645734
Start: 1186442
End: 1186876
Strand: Reverse
Name: Not Available
Synonym: HP1120
Alternate gene names: NA
Gene position: 1186876-1186442 (Counterclockwise)
Preceding gene: 15645735
Following gene: 15645733
Centisome position: 71.16
GC content: 35.63
Gene sequence:
>435_bases ATGGTCGTTTTACATTCTCATTTAGAAAACGCGCTAAAACAATTGAAAGAATTGATTGATTTAACCGAGCGCGATATAAG AGACATCAAGCTCGCTAAACACACCGAAATTTTTGAAAGAAACCATCAAAAACAGCTAGCGATTCAAGCTTTTGAAAAAG AAAAAGCGAATATAGATGTGCAAATGTTGTCTTTAAAAAACCAATTCCCTGATAAAGAAATGAGTGAATTATTAGACGAA AAAACGAGCGATTTTTTAAACCAAATGCGAGAGTCCTTGTTTGTTTTGAAAGAAAAAAACTTGATTTATTCGCGCATGGC GTTTGCGGTTTCTGAATTTTATTCTTCGCTCATCCAACAAATCATTCCCCATGACACTTGCGATTATAAAGGCTCTAGGC ATGTGGGGAGTCATTTTTTAAGAGTGCAGGCGTAA
Upstream 100 bases:
>100_bases CAAAATACCCCCTATCCCCTTAAGAAATTGGGTTTTTACAATAAAAAAATGGCATAGTATTTGCTTGAATACGGCTGAAA CAAGAGCTAAAGGATTTGTT
Downstream 100 bases:
>100_bases AATGGGCGGAATCTTATCTTCACTCAACACTTCTTACACCGGCCTTCAAGCCCATCAGAGCATGGTGGATGTTACCGGGA ATAATATTTCTAACGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MVVLHSHLENALKQLKELIDLTERDIRDIKLAKHTEIFERNHQKQLAIQAFEKEKANIDVQMLSLKNQFPDKEMSELLDE KTSDFLNQMRESLFVLKEKNLIYSRMAFAVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA
Sequences:
>Translated_144_residues MVVLHSHLENALKQLKELIDLTERDIRDIKLAKHTEIFERNHQKQLAIQAFEKEKANIDVQMLSLKNQFPDKEMSELLDE KTSDFLNQMRESLFVLKEKNLIYSRMAFAVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA >Mature_144_residues MVVLHSHLENALKQLKELIDLTERDIRDIKLAKHTEIFERNHQKQLAIQAFEKEKANIDVQMLSLKNQFPDKEMSELLDE KTSDFLNQMRESLFVLKEKNLIYSRMAFAVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16946; Mature: 16946
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLHSHLENALKQLKELIDLTERDIRDIKLAKHTEIFERNHQKQLAIQAFEKEKANIDV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QMLSLKNQFPDKEMSELLDEKTSDFLNQMRESLFVLKEKNLIYSRMAFAVSEFYSSLIQQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIPHDTCDYKGSRHVGSHFLRVQA HCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MVVLHSHLENALKQLKELIDLTERDIRDIKLAKHTEIFERNHQKQLAIQAFEKEKANIDV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QMLSLKNQFPDKEMSELLDEKTSDFLNQMRESLFVLKEKNLIYSRMAFAVSEFYSSLIQQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIPHDTCDYKGSRHVGSHFLRVQA HCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA