Definition | Helicobacter pylori 26695, complete genome. |
---|---|
Accession | NC_000915 |
Length | 1,667,867 |
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Identifier: 15645732
GI number: 15645732
Start: 1182706
End: 1184409
Strand: Reverse
Name: Not Available
Synonym: HP1118
Alternate gene names: 15645732
Gene position: 1184409-1182706 (Counterclockwise)
Preceding gene: 15645733
Following gene: 15645731
Centisome position: 71.01
GC content: 43.49
Gene sequence:
>1704_bases ATGAGACGGAGTTTTTTGAAAACGATTGGCTTGGGTGTGATAGCACTCTTTTTGGGTTTGTTAAACCCTTTGAGTGCGGC GAGTTACCCCCCCATTAAAAACACTAAAGTAGGCTTAGCCCTTTCTAGCCACCCGCTAGCTAGTGAGATCGGGCAAAAGG TTTTAGAAGAGGGAGGTAATGCGATTGATGCGGCTGTAGCGATAGGTTTTGCTCTTGCGGTTGTCCATCCGGCAGCAGGC AATATTGGTGGAGGCGGTTTTGCGGTTATCCATTTGGCTAATGGTGAAAATGTTGCGTTAGATTTTAGAGAAAAAGCCCC CTTAAAAGCCACTAAAAACATGTTTTTAGACAAGCAAGGCAATGTAGTCCCTAAACTCAGCGAAGATGGCTATTTGGCGG CCGGGGTTCCTGGAACGGTGGCAGGCATGGAAGCGATGCTGAAAAAATACGGCACTAAAAAACTATCGCAACTCATTGAT CCTGCCATTAAATTGGCTGAAAATGGTTATGCGATTTCACAAAGACAAGCAGAAACCCTAAAGGAAGCAAGGGAGCGGTT TTTAAAATACAGTTCTAGCAAAAAGTATTTTTTTAAAAAAGGCCATCTTGATTATCAAGAAGGGGATTTGTTTGTCCAAA AAGATTTAGCCAAGACTTTGAATCAAATCAAAACGCTAGGCGCTAAAGGCTTTTATCAAGGGCAAGTCGCTGAGCTTATT GAGAAAGACATGAAAAAAAATGGAGGGATTATCACTAAAGAAGATTTAGCCAGTTACAATGTGAAATGGCGCAAACCCGT GGTAGGGAGTTATCGTGGGTATAAGATCATTTCTATGTCGCCGCCAAGTTCGGGAGGCACGCATTTGATCCAGATTTTAA ATGTCATGGAAAATGCGGATTTAAGCGCCCTTGGGTATGGGGCTTCTAAGAATATCCATATCGCTGCCGAAGCGATGCGT CAGGCTTATGCGGATAGATCGGTTTATATGGGAGACGCTGATTTTGTTTCGGTGCCGGTGGATAAATTGATTAATAAAGC GTATGCCAAAAAGATTTTTGACACTATCCAGCCAGATACGGTTACGCCAAGCTCTCAAATCAAACCAGGAATGGGGCAGT TGCATGAGGGGAGCAATACCACGCATTATTCTGTAGCGGACAGGTGGGGGAATGCAGTCAGCGTTACTTACACCATTAAC GCTTCTTATGGAAGCGCTGCCAGTATTGATGGGGCAGGATTTTTATTGAACAATGAAATGGATGATTTTTCCATCAAGCC AGGGAATCCCAATCTCTATGGTTTAGTAGGGGGCGATGCGAATGCGATTGAAGCCAATAAGCGCCCTTTAAGCTCCATGT CGCCTACGATTGTGTTGAAAAACAATAAGGTTTTTTTGGTGGTGGGAAGCCCTGGAGGGTCTAGGATTATCACTACGGTG CTGCAAGTGATTTCTAATGTCATTGATTATAATATGAATATTTCTGAAGCGGTTTCAGCCCCAAGATTTCACATGCAATG GCTCCCTGATGAATTAAGGATTGAAAAGTTTGGCATGCCCGCTGATGTGAAAGACAACCTCACTAAAATGGGCTATCAAA TCGTTACTAAGCCGGTCATGGGTGATGTGAATGCGATCCAAGTTTTGCCTAAAACTAAAGGGAGCGTTTTCTATGGTTCA ACGGATCCAAGGAAAGAATTTTAA
Upstream 100 bases:
>100_bases ATTAATAGCATCATGTAAGTTATAAGCGAGAGAGTGTTTTGTAAAGCTTGTGTTATAATAACAAAGAAATTTTAAGCGTA ACTGATTGAAAGGAAAACAG
Downstream 100 bases:
>100_bases TTCTTTGTCATATACAGGTTTTTAATCCTATTTAGCCTTATTTTTTGGGATGGAGGGGGGCTTTTTAGCGAGAAAATCTT AAATTTAGTTTTAAAATTCA
Product: gamma-glutamyltranspeptidase (ggt)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MRRSFLKTIGLGVIALFLGLLNPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYAISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDTIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFLVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF
Sequences:
>Translated_567_residues MRRSFLKTIGLGVIALFLGLLNPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYAISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDTIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFLVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF >Mature_567_residues MRRSFLKTIGLGVIALFLGLLNPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYAISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDTIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFLVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=479, Percent_Identity=32.3590814196242, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI73915090, Length=479, Percent_Identity=32.3590814196242, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI73915096, Length=479, Percent_Identity=32.3590814196242, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI73915094, Length=479, Percent_Identity=32.3590814196242, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI113429324, Length=477, Percent_Identity=30.8176100628931, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI113429326, Length=481, Percent_Identity=30.3534303534304, Blast_Score=186, Evalue=8e-47, Organism=Homo sapiens, GI109148539, Length=473, Percent_Identity=28.9640591966173, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI153266885, Length=552, Percent_Identity=25.5434782608696, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI153266901, Length=548, Percent_Identity=26.0948905109489, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI153266907, Length=551, Percent_Identity=24.8638838475499, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI30581157, Length=176, Percent_Identity=38.0681818181818, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI30581155, Length=176, Percent_Identity=38.0681818181818, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI218505805, Length=174, Percent_Identity=34.4827586206897, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI310124095, Length=174, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789856, Length=537, Percent_Identity=52.7001862197393, Blast_Score=559, Evalue=1e-160, Organism=Caenorhabditis elegans, GI212646519, Length=499, Percent_Identity=35.0701402805611, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI72000294, Length=499, Percent_Identity=35.0701402805611, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI193208247, Length=551, Percent_Identity=33.3938294010889, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI193208245, Length=551, Percent_Identity=33.3938294010889, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17506189, Length=546, Percent_Identity=32.6007326007326, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17542894, Length=493, Percent_Identity=32.4543610547667, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI72001495, Length=228, Percent_Identity=32.0175438596491, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI72001497, Length=228, Percent_Identity=32.0175438596491, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17564448, Length=437, Percent_Identity=25.858123569794, Blast_Score=96, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6323330, Length=523, Percent_Identity=31.5487571701721, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI161077496, Length=538, Percent_Identity=33.457249070632, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI18859893, Length=521, Percent_Identity=31.6698656429942, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI45551474, Length=542, Percent_Identity=29.8892988929889, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI161077880, Length=542, Percent_Identity=29.8892988929889, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI24642670, Length=542, Percent_Identity=29.8892988929889, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI24642666, Length=542, Percent_Identity=29.8892988929889, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI161077878, Length=542, Percent_Identity=29.8892988929889, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI18859741, Length=531, Percent_Identity=28.060263653484, Blast_Score=162, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61152; Mature: 61152
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00462 G_GLU_TRANSPEPTIDASE ; PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSFLKTIGLGVIALFLGLLNPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEEGGN CCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC AIDAAVAIGFALAVVHPAAGNIGGGGFAVIHLANGENVALDFREKAPLKATKNMFLDKQG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCC NVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHH KEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELI HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENAD HHHHHHCCCEEEHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC LSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDTIQPDT CCEECCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCC VTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEM CCCHHCCCCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEECCCC DDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFLVVGSPGGSRIITTV CCCEECCCCCCEEEEECCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHH LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKPVM HHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHCHHHEECCCC GDVNAIQVLPKTKGSVFYGSTDPRKEF CCCCEEEEEECCCCCEEECCCCCCCCC >Mature Secondary Structure MRRSFLKTIGLGVIALFLGLLNPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEEGGN CCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC AIDAAVAIGFALAVVHPAAGNIGGGGFAVIHLANGENVALDFREKAPLKATKNMFLDKQG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCC NVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHH KEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELI HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENAD HHHHHHCCCEEEHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC LSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDTIQPDT CCEECCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCC VTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEM CCCHHCCCCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEECCCC DDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFLVVGSPGGSRIITTV CCCEECCCCCCEEEEECCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHH LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKPVM HHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCCCHHHHHHHHCHHHEECCCC GDVNAIQVLPKTKGSVFYGSTDPRKEF CCCCEEEEEECCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2570061; 9278503; 8041620; 1360205 [H]