Definition | Helicobacter pylori 26695, complete genome. |
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Accession | NC_000915 |
Length | 1,667,867 |
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Identifier: 15645729
GI number: 15645729
Start: 1177684
End: 1178370
Strand: Reverse
Name: Not Available
Synonym: HP1115
Alternate gene names: NA
Gene position: 1178370-1177684 (Counterclockwise)
Preceding gene: 15645730
Following gene: 15645728
Centisome position: 70.65
GC content: 37.12
Gene sequence:
>687_bases ATGATCAATTACCCTAATCTACCTAATAGCGCGCTAGAAATCACCGAACAGCCAGAAGTCAAAGAAATCACTAACGAGCT TTTAAAGCAACTACAAAACGCTTTAAATTCTAATAGCCTTTTTAGCGAACAAGTGGAATTAAGCCTTAAAGGGATCGTTA GGATTTTAGAGGTGCTTTTAAGTTTGGATTTTTTCAAAAACGCTAATGAGATCGATAGCAGTTTGAGAAACTCCATTGAA TGGCTTAACAACGCCGGCGAGAGCTTAAAAACGAAAATGAAAGAATACGAGGGCTTTTTTAGCGATTTCAATACGAGCAT GCGCACCAACGAGCAAGAAGTAAGTGCTACTTTAAACGCTAACACCGAAAACATCAAAAGCGAGATTAAAAAGCTAGAAA ATCAATTGATAGAAACCACTACAAGGCTTTTAACGAGCTATCAAATCTTTTTAAACAACGCTAGGGATAGCGCTAACAAT CAAATCACGGCTAACAAAACCGAAAGCCTTGAAGCGCTAAACCAAGCGAAAACAAGTGCTAACAACGAAATAACCGCTAA TCAAACGCAAGCGCTAACTAACATTAACGAAGCAAAAGAAAACGCTAACAATCAAATAACCGAAAATAAAACCCAAGCGA TAACTAACATTAACGAAGCGAAAAACCAATCATTATCAAAACATTGA
Upstream 100 bases:
>100_bases ATTGAGTCGCCTTTAGCACCAAATTACAAGGGGAAAGATACTAATCCCCTAAACCTTGATAGCCCTAATCCTACCACAAA AAATTAAAAAAAGGAATACA
Downstream 100 bases:
>100_bases TTTTTTTGAGATTGAATAAGGCGTGTTAAAAAACCACTATAATACCCCTAAAAAATGCGAGTTTAAAACATGCCCTTATT TGATTTAAAAAGCCCTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANN QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH
Sequences:
>Translated_228_residues MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANN QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH >Mature_228_residues MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANN QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25673; Mature: 25673
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA