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The map label for this gene is recJ [H]

Identifier: 15607096

GI number: 15607096

Start: 1519140

End: 1520756

Strand: Direct

Name: recJ [H]

Synonym: aq_2155

Alternate gene names: 15607096

Gene position: 1519140-1520756 (Clockwise)

Preceding gene: 15607095

Following gene: 15607097

Centisome position: 97.92

GC content: 43.17

Gene sequence:

>1617_bases
ATGAAAGGTGTTAAAGGAAGAAGGTGGGTACTCCTCTACAGAGAAAAAGAACCGCCTAGTTTTCTAGTTGAAAAGTACGG
AAGAATTCTAGCCCAGCTTATCACAAACAGGGGATATGAGAGGGAAGCGGATAAATTTTTAAACCCGAAACTATCACACA
TTCCCACATACAGGGAACTTGAAGGTATAGAGGAGGCTATAGAGAGAATAAAAGAAGCGGTATTGAAGAAGAAAAGAATA
ATAATATACGGGGACTACGACGTTGACGGAATAACGGGAACGGCAATCCTCTACAGAGTTTTGAAACTCCTCGGTGCAAA
AGTTTATCCCGTTCTACCGAACAGACAAACGGGATACGGTCTCAACAAAGAATTAATGTCCATATTTGAGAAGTACGGAG
ATTTTCTCATAACCGTTGATAACGGCACTTCCGCAGTTGAGGAAATAGACCAGTCAAGTTTAGAAACCGTGGTAATAGAC
CACCACAACGTTCCGCCCAGAATTCCAAAGAAAGCCCTGATAGTTAATCCGAAAGTCGGGGCAAAAAGGGAAGGCTTAAA
GGCTCTATCTTCCTCAGCTTTGAGTTTTTACCTCGGCAGTGCCTTGATAAGGGAATTTAACTTAGACGAAGATCCCAGAA
ACTTTTTAGATCTGGTTGCCCTAGGACTCCTTGCGGATTACATGCCCGTAAATCCAGTCACCCGCACACTCGCCGTTAAG
GGAATGTACTTGCTAGAGAAAATAGCTCAAGGCAAGGTAAGAAAACCGGGGGTGAAGGCACTTTTAGAGATTTCTTCGGT
AAACGGTAACGTCACTTCAAGGGACGTATACTTTTCCTTAGCTCCGAGGATAAACGCTGCGGGTAGGATTTCAAAGCCGA
AGTTTGCCCTTGATCTCCTCCTTGAAGAAGACGAGAGGAGGGCAAGGGAACTTGCGTTAAAACTCGAGGAAATCAACAGA
AGAAGAAAGGCTATAACAAACCTGACTTACAAGGAAGCGAAAAAGAAGGCTATTGAGGAAATTGATAAAAACTTCTTGGT
AGTCTGGGACGAGGAGTGGCATCCAGGAATTCTCGGTATAGTTGCTGGAAGACTTGCGGGAGAATTTAACAAACCCGTCG
CCGTGTTTTCTAAAGGAAAGACGAAAGCGGTAGGCTCTATAAGGAGCATAGAGAGTATTGACGTTTATGACAAGGTAAGC
ACTATGCGTGATATGTTCCTCAAATGGGGCGGACACGACAAGGCTATGGGACTCACGCTCCCTTCAAATAGACTTGAGGA
GTTCAGAGAAAAGGTAAACCAGATATTCGAAAAAGTTAAAGAGAGTGAAGTGATAATTCCGGTTGATATGGAAATAGATC
CGAGAGAATTCGGAGAAGAAGATTTAAGAACCATTAAATCCCTCGAACCTTTCGGAGAGGGAAATCCCCATCCCACGTTT
ATGACCACGGTAAAAGATGTAAAGCTCGGAGAAGGCTACAAGGTTTCTATAAACAGTGTAGAGATGGAGTGCTGGGATAC
GGAACTTCTTAAACACTTAAAAATCGGCAAAAAAATACTTTACAGACTTGACGGCGGGAAGTTTATCTTAGAGGATGTAG
AAAATGGCTTCGTATAA

Upstream 100 bases:

>100_bases
TACGGATTTTGACAAATGTTTTAGAAATCGTTTCATTAATCCTGATACTTGTATCCTGGGTGGATTACACACTTAAGGGC
TTTAAAATGATTTTTAAGGA

Downstream 100 bases:

>100_bases
AGGGCATGAGTTATTTAACGTTCTCGCTTTAGGTCCTCTAATTTTGTTAGTTCCTCAGGATTACAGAATCCCTTTCGGAA
TTGGATACCTTCTCGGAACT

Product: single-strand-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MKGVKGRRWVLLYREKEPPSFLVEKYGRILAQLITNRGYEREADKFLNPKLSHIPTYRELEGIEEAIERIKEAVLKKKRI
IIYGDYDVDGITGTAILYRVLKLLGAKVYPVLPNRQTGYGLNKELMSIFEKYGDFLITVDNGTSAVEEIDQSSLETVVID
HHNVPPRIPKKALIVNPKVGAKREGLKALSSSALSFYLGSALIREFNLDEDPRNFLDLVALGLLADYMPVNPVTRTLAVK
GMYLLEKIAQGKVRKPGVKALLEISSVNGNVTSRDVYFSLAPRINAAGRISKPKFALDLLLEEDERRARELALKLEEINR
RRKAITNLTYKEAKKKAIEEIDKNFLVVWDEEWHPGILGIVAGRLAGEFNKPVAVFSKGKTKAVGSIRSIESIDVYDKVS
TMRDMFLKWGGHDKAMGLTLPSNRLEEFREKVNQIFEKVKESEVIIPVDMEIDPREFGEEDLRTIKSLEPFGEGNPHPTF
MTTVKDVKLGEGYKVSINSVEMECWDTELLKHLKIGKKILYRLDGGKFILEDVENGFV

Sequences:

>Translated_538_residues
MKGVKGRRWVLLYREKEPPSFLVEKYGRILAQLITNRGYEREADKFLNPKLSHIPTYRELEGIEEAIERIKEAVLKKKRI
IIYGDYDVDGITGTAILYRVLKLLGAKVYPVLPNRQTGYGLNKELMSIFEKYGDFLITVDNGTSAVEEIDQSSLETVVID
HHNVPPRIPKKALIVNPKVGAKREGLKALSSSALSFYLGSALIREFNLDEDPRNFLDLVALGLLADYMPVNPVTRTLAVK
GMYLLEKIAQGKVRKPGVKALLEISSVNGNVTSRDVYFSLAPRINAAGRISKPKFALDLLLEEDERRARELALKLEEINR
RRKAITNLTYKEAKKKAIEEIDKNFLVVWDEEWHPGILGIVAGRLAGEFNKPVAVFSKGKTKAVGSIRSIESIDVYDKVS
TMRDMFLKWGGHDKAMGLTLPSNRLEEFREKVNQIFEKVKESEVIIPVDMEIDPREFGEEDLRTIKSLEPFGEGNPHPTF
MTTVKDVKLGEGYKVSINSVEMECWDTELLKHLKIGKKILYRLDGGKFILEDVENGFV
>Mature_538_residues
MKGVKGRRWVLLYREKEPPSFLVEKYGRILAQLITNRGYEREADKFLNPKLSHIPTYRELEGIEEAIERIKEAVLKKKRI
IIYGDYDVDGITGTAILYRVLKLLGAKVYPVLPNRQTGYGLNKELMSIFEKYGDFLITVDNGTSAVEEIDQSSLETVVID
HHNVPPRIPKKALIVNPKVGAKREGLKALSSSALSFYLGSALIREFNLDEDPRNFLDLVALGLLADYMPVNPVTRTLAVK
GMYLLEKIAQGKVRKPGVKALLEISSVNGNVTSRDVYFSLAPRINAAGRISKPKFALDLLLEEDERRARELALKLEEINR
RRKAITNLTYKEAKKKAIEEIDKNFLVVWDEEWHPGILGIVAGRLAGEFNKPVAVFSKGKTKAVGSIRSIESIDVYDKVS
TMRDMFLKWGGHDKAMGLTLPSNRLEEFREKVNQIFEKVKESEVIIPVDMEIDPREFGEEDLRTIKSLEPFGEGNPHPTF
MTTVKDVKLGEGYKVSINSVEMECWDTELLKHLKIGKKILYRLDGGKFILEDVENGFV

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=499, Percent_Identity=31.6633266533066, Blast_Score=208, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60952; Mature: 60952

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVKGRRWVLLYREKEPPSFLVEKYGRILAQLITNRGYEREADKFLNPKLSHIPTYREL
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHCCCHHHH
EGIEEAIERIKEAVLKKKRIIIYGDYDVDGITGTAILYRVLKLLGAKVYPVLPNRQTGYG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC
LNKELMSIFEKYGDFLITVDNGTSAVEEIDQSSLETVVIDHHNVPPRIPKKALIVNPKVG
CCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCC
AKREGLKALSSSALSFYLGSALIREFNLDEDPRNFLDLVALGLLADYMPVNPVTRTLAVK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GMYLLEKIAQGKVRKPGVKALLEISSVNGNVTSRDVYFSLAPRINAAGRISKPKFALDLL
HHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LEEDERRARELALKLEEINRRRKAITNLTYKEAKKKAIEEIDKNFLVVWDEEWHPGILGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
VAGRLAGEFNKPVAVFSKGKTKAVGSIRSIESIDVYDKVSTMRDMFLKWGGHDKAMGLTL
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PSNRLEEFREKVNQIFEKVKESEVIIPVDMEIDPREFGEEDLRTIKSLEPFGEGNPHPTF
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCC
MTTVKDVKLGEGYKVSINSVEMECWDTELLKHLKIGKKILYRLDGGKFILEDVENGFV
EEEEHHEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCCCCC
>Mature Secondary Structure
MKGVKGRRWVLLYREKEPPSFLVEKYGRILAQLITNRGYEREADKFLNPKLSHIPTYREL
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHCCCHHHH
EGIEEAIERIKEAVLKKKRIIIYGDYDVDGITGTAILYRVLKLLGAKVYPVLPNRQTGYG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC
LNKELMSIFEKYGDFLITVDNGTSAVEEIDQSSLETVVIDHHNVPPRIPKKALIVNPKVG
CCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCC
AKREGLKALSSSALSFYLGSALIREFNLDEDPRNFLDLVALGLLADYMPVNPVTRTLAVK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GMYLLEKIAQGKVRKPGVKALLEISSVNGNVTSRDVYFSLAPRINAAGRISKPKFALDLL
HHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LEEDERRARELALKLEEINRRRKAITNLTYKEAKKKAIEEIDKNFLVVWDEEWHPGILGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
VAGRLAGEFNKPVAVFSKGKTKAVGSIRSIESIDVYDKVSTMRDMFLKWGGHDKAMGLTL
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PSNRLEEFREKVNQIFEKVKESEVIIPVDMEIDPREFGEEDLRTIKSLEPFGEGNPHPTF
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCC
MTTVKDVKLGEGYKVSINSVEMECWDTELLKHLKIGKKILYRLDGGKFILEDVENGFV
EEEEHHEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]