Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
---|---|
Accession | NC_002663 |
Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is 15602604
Identifier: 15602604
GI number: 15602604
Start: 869803
End: 870189
Strand: Direct
Name: 15602604
Synonym: PM0739
Alternate gene names: NA
Gene position: 869803-870189 (Clockwise)
Preceding gene: 15602603
Following gene: 15602605
Centisome position: 38.53
GC content: 39.28
Gene sequence:
>387_bases ATGTCATTAAGGCAGGCAATCTTGCCTGCCTGTTTGAATAACACAGGGGATAGCATGGCGATTGTAACAAATACCCCTAT TTGGGTTTGGTGCGTTTTGCTTTGTTTACTCTACGTTGGCAGTAAACAAAGCAAAACACGTCAAATAAAACCTTATAAAT TAACATTCTTGCCCTTGATATTTCTGCCTATAGTCATCATGTCTATAATGCAAAGTCATCACCCGCTTATCGCAGGTTTC GGATTCATTGTTGGCTTGGCGCTAGGTCTATTTTTTAGGGTGGATAATTTGGAAGGATGCCCCTTTGTTACTAAGACAAG GGCAACAGTGGATACAAAGAGGAAGTTATCTTCCGCTTATCCTGTACTTATTCATTTTTATTTTTAG
Upstream 100 bases:
>100_bases AGTGGGGATTTCTGCGGGTTTAATTCGTCTTTCTTGCGGTATTGAAAGTATCCAAGATATTTTGGCTGACTTAGAACAAG CATTCCACGCGGCAAAATAA
Downstream 100 bases:
>100_bases GTATGTTGTTGGCGTGGCACAACATACTCAACAAACAATAACAAAAACAGAATTCTTTAATTTTATTATCGGATTACCTA CAGGGATTGGGCTTGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSLRQAILPACLNNTGDSMAIVTNTPIWVWCVLLCLLYVGSKQSKTRQIKPYKLTFLPLIFLPIVIMSIMQSHHPLIAGF GFIVGLALGLFFRVDNLEGCPFVTKTRATVDTKRKLSSAYPVLIHFYF
Sequences:
>Translated_128_residues MSLRQAILPACLNNTGDSMAIVTNTPIWVWCVLLCLLYVGSKQSKTRQIKPYKLTFLPLIFLPIVIMSIMQSHHPLIAGF GFIVGLALGLFFRVDNLEGCPFVTKTRATVDTKRKLSSAYPVLIHFYF >Mature_127_residues SLRQAILPACLNNTGDSMAIVTNTPIWVWCVLLCLLYVGSKQSKTRQIKPYKLTFLPLIFLPIVIMSIMQSHHPLIAGFG FIVGLALGLFFRVDNLEGCPFVTKTRATVDTKRKLSSAYPVLIHFYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y739_PASMU (Q9CMS3)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245676.1 - GeneID: 1244086 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0739 - NMPDR: fig|272843.1.peg.739 - BioCyc: PMUL272843:PM0739-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14392; Mature: 14260
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc32a50c)-; HASH(0xd804c7c)-; HASH(0xd7ba628)-;
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRQAILPACLNNTGDSMAIVTNTPIWVWCVLLCLLYVGSKQSKTRQIKPYKLTFLPLI CCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH FLPIVIMSIMQSHHPLIAGFGFIVGLALGLFFRVDNLEGCPFVTKTRATVDTKRKLSSAY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC PVLIHFYF CEEEEEEH >Mature Secondary Structure SLRQAILPACLNNTGDSMAIVTNTPIWVWCVLLCLLYVGSKQSKTRQIKPYKLTFLPLI CHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH FLPIVIMSIMQSHHPLIAGFGFIVGLALGLFFRVDNLEGCPFVTKTRATVDTKRKLSSAY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC PVLIHFYF CEEEEEEH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100