Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is ttrS [H]
Identifier: 15602589
GI number: 15602589
Start: 854154
End: 855869
Strand: Direct
Name: ttrS [H]
Synonym: PM0724
Alternate gene names: 15602589
Gene position: 854154-855869 (Clockwise)
Preceding gene: 15602585
Following gene: 15602590
Centisome position: 37.84
GC content: 39.74
Gene sequence:
>1716_bases GTGAAAAAATGCAGTTCATTTTTAAAAATGTTTATTTTATTACTCAGCTTCATGCCAGCGCTTGTTTATGCACAGCAATG GAAAATTGGCATTCTGGCACAACGAGGTGTGGCACATACGCACGCTACTTGGCAACCTTGGATAGATTGGCTTAACCAAC ACCTCTCACCTCATCAATTCACCTTAGTTACCTTAGATCTTAACGATCTAATACAAGATCAGGCGCAAGGCGTCGATTTT ATTTTATCCAATCAAGCACAGTTTTTTTATTTAAACAATAATGAAGTACGTTGGCTGGTAACCTTACGTTCACCAAGGCA AATTCAATCTTCTACCATGGGCAGAATTGGTAGTGCGATTTTAGTTCGTCAAGACAGCCCATTCCACCAGCTTACTGATT TACGCCACAAAACCGTGAGTGCGGTAGGTGATAATGCCTTCGGCGGCTTTCTACTGGGCTATAACGAATTCTATCAACAA GGTTTAGTCGAAAATAAAGACTTTCAATTAAAATTTACGGGTTTCCCTGTGGATAATACCTTGCTACTGCTGCAAGAAAG AAAAGTTGACGCGGCGATTGTGCCGGTGTGTATTTTAGAAGAATTAGTCAACGAAGGTGTGGTGAAAAAAGAAGATTTTC GACTCTTAGCCGGCAAAGAAAATGTGTTAGGTTGTCTCGCTAGCACGGAATTACTGCCAAACTGGTCTTTAGCAGCACTT TCACAAGTACCAGATAGTCTTGCATCAAAATTGGTCACACTTTTATTAAGTCAAGTGCCCGCACATTTACCACAATGGAC ACCGCCTTATTCTACCTCACAAGCCGATACTGTGTTACGAGGATTATACAAACACCCACAACAAAACTTATGGGACAGTA CAAAATATTGGTTACAACAATATCAAGGTTGGATTATTTTTGTCCTCTTATTACTTGTCTTAAATTATCTGTGGATTAGC TTTCAAATTCATCGTAAAAGCAAAGCGTTGCAACAAGCTTATCGAGAAATGCGACACTATGAACAGCAATTAGTACAAGC TGATCGACTAAGCATTTTAGGCGAAATGAGTACAGGCATTGCCCATGAAATTAATCAACCTTTATCCGCCATCCGTATGT ATGTCGAAGGGGTGAAATACCATTTAGCACAGCTGCCTGCCGAAAAAAATACAGTTGAAATTTTAGATAAGGTATTACAA CAAGTTGATCGCAGTGCAGATATTATCCGTAATTTAATGAATTGGGCAAAAGGCAAAAAAACACCAAGTTCTGAGTGTGT GGCACTCAAGCCCTTACTACAACGTGTAATCAGCTTTATGTCTTTACAAACACATCAGAAAGCCCAATTAAACTTGAATT GTCCAGCCTCGTTAAAACTCAAAATTGATACGACTTTACTCGAACAAGTTTTGTGTAACTGCTTGCTTAATGCTTCACAA GCGGGAGCAAGTGAGATCGAAGTGAACGTGAAAGCCGTGGGCGAATACATGACTATTCATATTGTTGATAATGGTTCAGG CTTCAAAGCTGGCGAACTTGCTTTTCCGTTTGTCCCTTTTCGCAGTAGTAAAGCGAATGGACTAGGTTTAGGCTTGGTAC TATGTCAACGATTAATGCGTTCGATTAATGGTGACATTTCTTTGCATAACCGCCTTGATCAACAAGGAGCGGAAGTGATT TTAAAATTACCAAATAAAGTGGGGGAAACATGTTAA
Upstream 100 bases:
>100_bases TTTTTTCTCGTATTGTTCAGGAAGGACGGCGAAAAAACTATTGTGGTTTTCCACATAAACAGTGAGTGAATTTGATTTCA ATCAAGAAAAGGAAGAAAAA
Downstream 100 bases:
>100_bases TTCATCTGGTTGATGATGACTTAACCGTTTTGGATGCGGCGCGTTTTTTATTAGAACAAGCTGGCTATCAAGTCCAAACA TGGTCAAATAGCCAAGCCTT
Product: TtrS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MKKCSSFLKMFILLLSFMPALVYAQQWKIGILAQRGVAHTHATWQPWIDWLNQHLSPHQFTLVTLDLNDLIQDQAQGVDF ILSNQAQFFYLNNNEVRWLVTLRSPRQIQSSTMGRIGSAILVRQDSPFHQLTDLRHKTVSAVGDNAFGGFLLGYNEFYQQ GLVENKDFQLKFTGFPVDNTLLLLQERKVDAAIVPVCILEELVNEGVVKKEDFRLLAGKENVLGCLASTELLPNWSLAAL SQVPDSLASKLVTLLLSQVPAHLPQWTPPYSTSQADTVLRGLYKHPQQNLWDSTKYWLQQYQGWIIFVLLLLVLNYLWIS FQIHRKSKALQQAYREMRHYEQQLVQADRLSILGEMSTGIAHEINQPLSAIRMYVEGVKYHLAQLPAEKNTVEILDKVLQ QVDRSADIIRNLMNWAKGKKTPSSECVALKPLLQRVISFMSLQTHQKAQLNLNCPASLKLKIDTTLLEQVLCNCLLNASQ AGASEIEVNVKAVGEYMTIHIVDNGSGFKAGELAFPFVPFRSSKANGLGLGLVLCQRLMRSINGDISLHNRLDQQGAEVI LKLPNKVGETC
Sequences:
>Translated_571_residues MKKCSSFLKMFILLLSFMPALVYAQQWKIGILAQRGVAHTHATWQPWIDWLNQHLSPHQFTLVTLDLNDLIQDQAQGVDF ILSNQAQFFYLNNNEVRWLVTLRSPRQIQSSTMGRIGSAILVRQDSPFHQLTDLRHKTVSAVGDNAFGGFLLGYNEFYQQ GLVENKDFQLKFTGFPVDNTLLLLQERKVDAAIVPVCILEELVNEGVVKKEDFRLLAGKENVLGCLASTELLPNWSLAAL SQVPDSLASKLVTLLLSQVPAHLPQWTPPYSTSQADTVLRGLYKHPQQNLWDSTKYWLQQYQGWIIFVLLLLVLNYLWIS FQIHRKSKALQQAYREMRHYEQQLVQADRLSILGEMSTGIAHEINQPLSAIRMYVEGVKYHLAQLPAEKNTVEILDKVLQ QVDRSADIIRNLMNWAKGKKTPSSECVALKPLLQRVISFMSLQTHQKAQLNLNCPASLKLKIDTTLLEQVLCNCLLNASQ AGASEIEVNVKAVGEYMTIHIVDNGSGFKAGELAFPFVPFRSSKANGLGLGLVLCQRLMRSINGDISLHNRLDQQGAEVI LKLPNKVGETC >Mature_571_residues MKKCSSFLKMFILLLSFMPALVYAQQWKIGILAQRGVAHTHATWQPWIDWLNQHLSPHQFTLVTLDLNDLIQDQAQGVDF ILSNQAQFFYLNNNEVRWLVTLRSPRQIQSSTMGRIGSAILVRQDSPFHQLTDLRHKTVSAVGDNAFGGFLLGYNEFYQQ GLVENKDFQLKFTGFPVDNTLLLLQERKVDAAIVPVCILEELVNEGVVKKEDFRLLAGKENVLGCLASTELLPNWSLAAL SQVPDSLASKLVTLLLSQVPAHLPQWTPPYSTSQADTVLRGLYKHPQQNLWDSTKYWLQQYQGWIIFVLLLLVLNYLWIS FQIHRKSKALQQAYREMRHYEQQLVQADRLSILGEMSTGIAHEINQPLSAIRMYVEGVKYHLAQLPAEKNTVEILDKVLQ QVDRSADIIRNLMNWAKGKKTPSSECVALKPLLQRVISFMSLQTHQKAQLNLNCPASLKLKIDTTLLEQVLCNCLLNASQ AGASEIEVNVKAVGEYMTIHIVDNGSGFKAGELAFPFVPFRSSKANGLGLGLVLCQRLMRSINGDISLHNRLDQQGAEVI LKLPNKVGETC
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=233, Percent_Identity=30.9012875536481, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790436, Length=261, Percent_Identity=28.3524904214559, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786912, Length=240, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=26.6094420600858, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790300, Length=207, Percent_Identity=26.5700483091787, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64424; Mature: 64424
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCSSFLKMFILLLSFMPALVYAQQWKIGILAQRGVAHTHATWQPWIDWLNQHLSPHQF CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE TLVTLDLNDLIQDQAQGVDFILSNQAQFFYLNNNEVRWLVTLRSPRQIQSSTMGRIGSAI EEEEEEHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCEE LVRQDSPFHQLTDLRHKTVSAVGDNAFGGFLLGYNEFYQQGLVENKDFQLKFTGFPVDNT EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHCCCCCCCCEEEEEECCCCCCE LLLLQERKVDAAIVPVCILEELVNEGVVKKEDFRLLAGKENVLGCLASTELLPNWSLAAL EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHH SQVPDSLASKLVTLLLSQVPAHLPQWTPPYSTSQADTVLRGLYKHPQQNLWDSTKYWLQQ HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH YQGWIIFVLLLLVLNYLWISFQIHRKSKALQQAYREMRHYEQQLVQADRLSILGEMSTGI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHEINQPLSAIRMYVEGVKYHLAQLPAEKNTVEILDKVLQQVDRSADIIRNLMNWAKGKK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPSSECVALKPLLQRVISFMSLQTHQKAQLNLNCPASLKLKIDTTLLEQVLCNCLLNASQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC AGASEIEVNVKAVGEYMTIHIVDNGSGFKAGELAFPFVPFRSSKANGLGLGLVLCQRLMR CCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SINGDISLHNRLDQQGAEVILKLPNKVGETC HHCCCEEHHHHHHHHHHHHHHHCCHHCCCCC >Mature Secondary Structure MKKCSSFLKMFILLLSFMPALVYAQQWKIGILAQRGVAHTHATWQPWIDWLNQHLSPHQF CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEE TLVTLDLNDLIQDQAQGVDFILSNQAQFFYLNNNEVRWLVTLRSPRQIQSSTMGRIGSAI EEEEEEHHHHHHHHHCCCEEEEECCEEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCEE LVRQDSPFHQLTDLRHKTVSAVGDNAFGGFLLGYNEFYQQGLVENKDFQLKFTGFPVDNT EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHCCCCCCCCEEEEEECCCCCCE LLLLQERKVDAAIVPVCILEELVNEGVVKKEDFRLLAGKENVLGCLASTELLPNWSLAAL EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHH SQVPDSLASKLVTLLLSQVPAHLPQWTPPYSTSQADTVLRGLYKHPQQNLWDSTKYWLQQ HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH YQGWIIFVLLLLVLNYLWISFQIHRKSKALQQAYREMRHYEQQLVQADRLSILGEMSTGI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHEINQPLSAIRMYVEGVKYHLAQLPAEKNTVEILDKVLQQVDRSADIIRNLMNWAKGKK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPSSECVALKPLLQRVISFMSLQTHQKAQLNLNCPASLKLKIDTTLLEQVLCNCLLNASQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC AGASEIEVNVKAVGEYMTIHIVDNGSGFKAGELAFPFVPFRSSKANGLGLGLVLCQRLMR CCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SINGDISLHNRLDQQGAEVILKLPNKVGETC HHCCCEEHHHHHHHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3671068 [H]