BacMap

Definition	Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession	NC_002663
Length	2,257,487

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The map label for this gene is 15602583

Identifier: 15602583

GI number: 15602583

Start: 845827

End: 847335

Strand: Direct

Name: 15602583

Synonym: PM0718

Alternate gene names: NA

Gene position: 845827-847335 (Clockwise)

Preceding gene: 15602582

Following gene: 15602584

Centisome position: 37.47

GC content: 42.54

Gene sequence:

>1509_bases
ATGACAACATCTTCTCAAAGTCGCGAAACGTTCTCTGGACGTAAAGCGTTTATTTTTGCTGCCATTGGATCAGCAGTTGG
GTTGGGAAATATTTGGCGTTTCCCTTATGTCACTTATGAAAACGGTGGTGGCGCGTTCATCATCCCTTATTTAGTTGCAT
TATTGACTGCCGGGATTCCACTCTTATTTTTAGATTATGCGATCGGTCATAAATATCGTGCCTCTCCACCGCTGGCATTT
CGTAAGTTAAACAAAAACTTTGAAACCTTTGGTTGGTGGCAAGTGTTGATCAACGTGATTATCGGGATTTACTATGCGGT
CATCATTGGTTGGGCTGCCTCTTATACGTATTTTTCATTGAATAGTGCATGGGGGGCAGATCCCGCGAGTTTCTTCTTTA
AAGAATACTTACAAATGGCAGAAGGCGTGGCAGTTAATTTTGACTTTGTTGCCAGCATAACTGGTCCATTAGTCGGCGTA
TGGATATTTATTTTAGTTATCTTGGCGTTAGGCGTACAAAAAGGGATCGGTAAATCCGCCACCTTCTTTATGCCACTTTT
AACCGTGATGTTTGTGATCTTGGTGATTACTGCGCTTTTCTTACCGGGTTCTGCAAAAGGCTTAAATGCCTTGTTTACGC
CAGACTGGTCTAAATTATTAGAACCAACCGTTTGGGTTGCTGCTTATGGACAAATTTTCTTCTCCTTGTCTATCTGTTTC
GGCATCATGATCACTTATTCGTCTTACTTGAAAAAACAAAGTGATTTAACGGGTTCAGGTTTAGTGGTTGGCTTTGCCAA
CAGTAGCTTTGAATTATTAGCCGGTATCGGTGTATTCGCAGCATTAGGCTTTATGGCAACCGCGGCAGGCAAAGAAGTGA
GCGAAGTCGCTACTTCAGGAATTGGCTTAGCCTTTATTGCCTTCCCTGCCATTATCGATCAAGCCCCATTTGGCAGTGTG
ATTGGCGTATTATTCTTCGGTTCCTTATTATTTGCTGGTATCACCTCACTGATGTCGATCTTAGAAGTGATTATCGCGGC
GGTACAAGATAAATTAAGAATGCGTCGCTCTGTTGCTACTGCATTGACTTGTGTTCCAATGGCAATTGTTTCCGTCTTAC
TGTTTGGCACCACCACTGGTTTACCTGTGTTAGACGTATTAGATAAATTCGTAAATAGCTTTGGTATTGTAGCTGTAGGT
TTAATGGTGATTTATGCGGTATTAATCAACGAATCACTTTCTGGCTTAGCGGCACACTTAAACGAAACCTCTTCCTTTAA
AGTTGGTGTGGTGTGGCGTGTACTTATCGGCACCATCACATCAACGGTGTTAGTGTATATGCTCTTTACTGAAATTAACA
AAGTGGCAACCGAAGGTTACGGTGGCTATCCAGCTTGGTTCGTCAATACCTTTGGTTGGGGCATGGCAATTGGCTTAGGG
GTGATCGCTTTCTTGCTCTCGCGTTTACCTTGGAAACACTTAACCGATTCGACAAAAGGAGATAAATAA

Upstream 100 bases:

>100_bases
AATAAAGTATATCGCCCTATTGACTGCTCCTTAAATTTCATTATATTTCTGAACTCTAACATTTTTTTAACCAAAACAAA
CAAAAACAAAGGTTGCTACT

Downstream 100 bases:

>100_bases
TGGGTACTAGCGCAATTATTATGATGATCGTGGCATTAGTGATCATTTGGGGAGGATTAATTCTCTCGGTGTCAAGATTA
CCAAAAGAATAAAATAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MTTSSQSRETFSGRKAFIFAAIGSAVGLGNIWRFPYVTYENGGGAFIIPYLVALLTAGIPLLFLDYAIGHKYRASPPLAF
RKLNKNFETFGWWQVLINVIIGIYYAVIIGWAASYTYFSLNSAWGADPASFFFKEYLQMAEGVAVNFDFVASITGPLVGV
WIFILVILALGVQKGIGKSATFFMPLLTVMFVILVITALFLPGSAKGLNALFTPDWSKLLEPTVWVAAYGQIFFSLSICF
GIMITYSSYLKKQSDLTGSGLVVGFANSSFELLAGIGVFAALGFMATAAGKEVSEVATSGIGLAFIAFPAIIDQAPFGSV
IGVLFFGSLLFAGITSLMSILEVIIAAVQDKLRMRRSVATALTCVPMAIVSVLLFGTTTGLPVLDVLDKFVNSFGIVAVG
LMVIYAVLINESLSGLAAHLNETSSFKVGVVWRVLIGTITSTVLVYMLFTEINKVATEGYGGYPAWFVNTFGWGMAIGLG
VIAFLLSRLPWKHLTDSTKGDK

Sequences:

>Translated_502_residues
MTTSSQSRETFSGRKAFIFAAIGSAVGLGNIWRFPYVTYENGGGAFIIPYLVALLTAGIPLLFLDYAIGHKYRASPPLAF
RKLNKNFETFGWWQVLINVIIGIYYAVIIGWAASYTYFSLNSAWGADPASFFFKEYLQMAEGVAVNFDFVASITGPLVGV
WIFILVILALGVQKGIGKSATFFMPLLTVMFVILVITALFLPGSAKGLNALFTPDWSKLLEPTVWVAAYGQIFFSLSICF
GIMITYSSYLKKQSDLTGSGLVVGFANSSFELLAGIGVFAALGFMATAAGKEVSEVATSGIGLAFIAFPAIIDQAPFGSV
IGVLFFGSLLFAGITSLMSILEVIIAAVQDKLRMRRSVATALTCVPMAIVSVLLFGTTTGLPVLDVLDKFVNSFGIVAVG
LMVIYAVLINESLSGLAAHLNETSSFKVGVVWRVLIGTITSTVLVYMLFTEINKVATEGYGGYPAWFVNTFGWGMAIGLG
VIAFLLSRLPWKHLTDSTKGDK
>Mature_501_residues
TTSSQSRETFSGRKAFIFAAIGSAVGLGNIWRFPYVTYENGGGAFIIPYLVALLTAGIPLLFLDYAIGHKYRASPPLAFR
KLNKNFETFGWWQVLINVIIGIYYAVIIGWAASYTYFSLNSAWGADPASFFFKEYLQMAEGVAVNFDFVASITGPLVGVW
IFILVILALGVQKGIGKSATFFMPLLTVMFVILVITALFLPGSAKGLNALFTPDWSKLLEPTVWVAAYGQIFFSLSICFG
IMITYSSYLKKQSDLTGSGLVVGFANSSFELLAGIGVFAALGFMATAAGKEVSEVATSGIGLAFIAFPAIIDQAPFGSVI
GVLFFGSLLFAGITSLMSILEVIIAAVQDKLRMRRSVATALTCVPMAIVSVLLFGTTTGLPVLDVLDKFVNSFGIVAVGL
MVIYAVLINESLSGLAAHLNETSSFKVGVVWRVLIGTITSTVLVYMLFTEINKVATEGYGGYPAWFVNTFGWGMAIGLGV
IAFLLSRLPWKHLTDSTKGDK

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI134304856, Length=502, Percent_Identity=29.6812749003984, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI21361581, Length=423, Percent_Identity=29.5508274231678, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI289191351, Length=525, Percent_Identity=29.1428571428571, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI4557046, Length=525, Percent_Identity=29.1428571428571, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI289191377, Length=525, Percent_Identity=29.1428571428571, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI4507041, Length=524, Percent_Identity=28.0534351145038, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI188528618, Length=392, Percent_Identity=32.3979591836735, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI7657587, Length=519, Percent_Identity=26.9749518304432, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI4507043, Length=482, Percent_Identity=29.4605809128631, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI171184408, Length=441, Percent_Identity=30.3854875283447, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI171184406, Length=441, Percent_Identity=30.3854875283447, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI171184404, Length=441, Percent_Identity=30.3854875283447, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI6005715, Length=555, Percent_Identity=28.8288288288288, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI197276623, Length=347, Percent_Identity=30.835734870317, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI54607094, Length=347, Percent_Identity=30.835734870317, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI67782317, Length=528, Percent_Identity=27.6515151515151, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI67782313, Length=528, Percent_Identity=27.6515151515151, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI67782315, Length=528, Percent_Identity=27.6515151515151, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI5032097, Length=430, Percent_Identity=30.4651162790698, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI194018524, Length=514, Percent_Identity=25.6809338521401, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI58219014, Length=312, Percent_Identity=30.7692307692308, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI33354281, Length=311, Percent_Identity=29.2604501607717, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI218563756, Length=430, Percent_Identity=30.4651162790698, Blast_Score=149, Evalue=9e-36,
Organism=Homo sapiens, GI11181770, Length=540, Percent_Identity=23.8888888888889, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI51468073, Length=310, Percent_Identity=28.0645161290323, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI92859670, Length=321, Percent_Identity=29.2834890965732, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI12408638, Length=522, Percent_Identity=23.3716475095785, Blast_Score=129, Evalue=9e-30,
Organism=Homo sapiens, GI289191353, Length=434, Percent_Identity=26.9585253456221, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI300360519, Length=235, Percent_Identity=31.063829787234, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI218563758, Length=270, Percent_Identity=32.2222222222222, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI226437581, Length=261, Percent_Identity=26.0536398467433, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI21361693, Length=220, Percent_Identity=25, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI197276625, Length=117, Percent_Identity=38.4615384615385, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI55749589, Length=310, Percent_Identity=23.8709677419355, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17555248, Length=506, Percent_Identity=26.8774703557312, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI133952791, Length=554, Percent_Identity=29.0613718411552, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17554804, Length=401, Percent_Identity=30.9226932668329, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17535731, Length=461, Percent_Identity=28.6334056399132, Blast_Score=168, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI71995588, Length=471, Percent_Identity=25.9023354564756, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25146584, Length=524, Percent_Identity=25.763358778626, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI212642127, Length=567, Percent_Identity=26.63139329806, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71998244, Length=390, Percent_Identity=29.7435897435897, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17569475, Length=397, Percent_Identity=26.9521410579345, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI115534083, Length=541, Percent_Identity=22.550831792976, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17542050, Length=114, Percent_Identity=36.8421052631579, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI281364136, Length=539, Percent_Identity=28.9424860853432, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI45550877, Length=528, Percent_Identity=28.219696969697, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI24639514, Length=507, Percent_Identity=27.0216962524655, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI45551183, Length=412, Percent_Identity=30.8252427184466, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24762620, Length=508, Percent_Identity=28.740157480315, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI221329674, Length=507, Percent_Identity=27.0216962524655, Blast_Score=191, Evalue=9e-49,
Organism=Drosophila melanogaster, GI17136952, Length=528, Percent_Identity=27.2727272727273, Blast_Score=186, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24639516, Length=527, Percent_Identity=25.9962049335863, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24652942, Length=490, Percent_Identity=29.5918367346939, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI45551088, Length=490, Percent_Identity=29.5918367346939, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI281363702, Length=500, Percent_Identity=30, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI281364394, Length=527, Percent_Identity=27.134724857685, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28574704, Length=527, Percent_Identity=27.134724857685, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI17136950, Length=527, Percent_Identity=27.134724857685, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28574702, Length=527, Percent_Identity=27.134724857685, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24654186, Length=543, Percent_Identity=27.9926335174954, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24655079, Length=518, Percent_Identity=27.7992277992278, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24582567, Length=509, Percent_Identity=27.1119842829077, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI281365034, Length=533, Percent_Identity=28.3302063789869, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24661428, Length=494, Percent_Identity=27.3279352226721, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19921352, Length=539, Percent_Identity=27.6437847866419, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24584353, Length=539, Percent_Identity=27.6437847866419, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI19921936, Length=528, Percent_Identity=27.4621212121212, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI281363700, Length=349, Percent_Identity=32.6647564469914, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24639853, Length=559, Percent_Identity=25.0447227191413, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24582569, Length=468, Percent_Identity=26.0683760683761, Blast_Score=128, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 53983; Mature: 53852

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSQSRETFSGRKAFIFAAIGSAVGLGNIWRFPYVTYENGGGAFIIPYLVALLTAGIP
CCCCCCCHHHHCCCCEEEHEEHHHHHCCCCEEECCEEEEECCCCEEHHHHHHHHHHCCCH
LLFLDYAIGHKYRASPPLAFRKLNKNFETFGWWQVLINVIIGIYYAVIIGWAASYTYFSL
HHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NSAWGADPASFFFKEYLQMAEGVAVNFDFVASITGPLVGVWIFILVILALGVQKGIGKSA
CCCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFFMPLLTVMFVILVITALFLPGSAKGLNALFTPDWSKLLEPTVWVAAYGQIFFSLSICF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
GIMITYSSYLKKQSDLTGSGLVVGFANSSFELLAGIGVFAALGFMATAAGKEVSEVATSG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
IGLAFIAFPAIIDQAPFGSVIGVLFFGSLLFAGITSLMSILEVIIAAVQDKLRMRRSVAT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTCVPMAIVSVLLFGTTTGLPVLDVLDKFVNSFGIVAVGLMVIYAVLINESLSGLAAHL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETSSFKVGVVWRVLIGTITSTVLVYMLFTEINKVATEGYGGYPAWFVNTFGWGMAIGLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VIAFLLSRLPWKHLTDSTKGDK
HHHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure 
TTSSQSRETFSGRKAFIFAAIGSAVGLGNIWRFPYVTYENGGGAFIIPYLVALLTAGIP
CCCCCCHHHHCCCCEEEHEEHHHHHCCCCEEECCEEEEECCCCEEHHHHHHHHHHCCCH
LLFLDYAIGHKYRASPPLAFRKLNKNFETFGWWQVLINVIIGIYYAVIIGWAASYTYFSL
HHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NSAWGADPASFFFKEYLQMAEGVAVNFDFVASITGPLVGVWIFILVILALGVQKGIGKSA
CCCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFFMPLLTVMFVILVITALFLPGSAKGLNALFTPDWSKLLEPTVWVAAYGQIFFSLSICF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
GIMITYSSYLKKQSDLTGSGLVVGFANSSFELLAGIGVFAALGFMATAAGKEVSEVATSG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
IGLAFIAFPAIIDQAPFGSVIGVLFFGSLLFAGITSLMSILEVIIAAVQDKLRMRRSVAT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTCVPMAIVSVLLFGTTTGLPVLDVLDKFVNSFGIVAVGLMVIYAVLINESLSGLAAHL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NETSSFKVGVVWRVLIGTITSTVLVYMLFTEINKVATEGYGGYPAWFVNTFGWGMAIGLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VIAFLLSRLPWKHLTDSTKGDK
HHHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]