Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602162
Identifier: 15602162
GI number: 15602162
Start: 340195
End: 341079
Strand: Reverse
Name: 15602162
Synonym: PM0297
Alternate gene names: NA
Gene position: 341079-340195 (Counterclockwise)
Preceding gene: 15602167
Following gene: 15602160
Centisome position: 15.11
GC content: 38.19
Gene sequence:
>885_bases ATGATTTTATCGTTTAATAGAATGAACAAGGAGGAAAACATGGCATTTGATTTTAAAAATATGATTTGTTTTGGTGTCGC AGGAAATTTCGCAGGTCATTTAGAACAAGCGGGTGAAGCGGCTGATTTTATTTCGGTGCAAACAGAAGAAGAAATTCAGC CGAAAGCGATTTTTCCTTTTTATGTACCGAGTGAAACACTCAATCCTGAACATCAATTTCTTGCCACGTTTCCTCTGACC CATGATCAAATCTGTTTTCCAAAGCAAAAAGGGGCGGATAATTTACAGATTGAACCAGAGATCGCCTTAATCTGTGATAT TGAATATCAAGAGAAACAAGTCATTTCTCTTACACCGCGTTTCTTTACCGCCTACAATGATTGTTCTATCCGTCGTCCCG ATGCAAAAAAAATTAGTGAAAAGAAAAACTGGGGAGAAAAAACCAAGGGGCTTGCTAACACGCTATTACCGCTAAGTTCT TTTGCACCAGGTTGTGAATTAGATCATTACCATATTGCCTGTTTTCATAAACGTGGTACAGATTTCAATGAATACGGCAT CGATAGTCCTGCTCTGGGTTATAGTTATTTTCATCAAAAGTTATTGAATTGGATAATCACTAAGATGAATACCCAACCTG ATCAAGGACCTATGAACGATATTCCTGCTTTATTAGCGAAAGCCAATTATCCTAAACAAGCCGTGATTGGCATTGGCGCA ACACGTTATACAGCTTTTGGCGAGCGTAATTTCTTACAAATTGGTGATACCAGTATTGTCGTAGTATATAACGCGAAAAA ATACGACCACGAAACAATTGTGTCGATGGCAAAACAAAACACGTTCGCTGAGGATATTGCAGCATTAGTACAAGTTGTTG TGTAA
Upstream 100 bases:
>100_bases CTTTGCAACCCCTTTTTACAAAAAAAGTTAATTTTTTTATTAGCTGTTTACAGAACAAACAAAAACGGTTGTTTTCGCTT AAATTTAAGACTAAAGTGAA
Downstream 100 bases:
>100_bases AGGATAAAGTGCGGTTAAAAATTTTCATTTTTTTGACCGCACTTTTATTTATAACGATAGTATCAAGAGGCTTTCCTGAG TGACACTTCCCCACCATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MILSFNRMNKEENMAFDFKNMICFGVAGNFAGHLEQAGEAADFISVQTEEEIQPKAIFPFYVPSETLNPEHQFLATFPLT HDQICFPKQKGADNLQIEPEIALICDIEYQEKQVISLTPRFFTAYNDCSIRRPDAKKISEKKNWGEKTKGLANTLLPLSS FAPGCELDHYHIACFHKRGTDFNEYGIDSPALGYSYFHQKLLNWIITKMNTQPDQGPMNDIPALLAKANYPKQAVIGIGA TRYTAFGERNFLQIGDTSIVVVYNAKKYDHETIVSMAKQNTFAEDIAALVQVVV
Sequences:
>Translated_294_residues MILSFNRMNKEENMAFDFKNMICFGVAGNFAGHLEQAGEAADFISVQTEEEIQPKAIFPFYVPSETLNPEHQFLATFPLT HDQICFPKQKGADNLQIEPEIALICDIEYQEKQVISLTPRFFTAYNDCSIRRPDAKKISEKKNWGEKTKGLANTLLPLSS FAPGCELDHYHIACFHKRGTDFNEYGIDSPALGYSYFHQKLLNWIITKMNTQPDQGPMNDIPALLAKANYPKQAVIGIGA TRYTAFGERNFLQIGDTSIVVVYNAKKYDHETIVSMAKQNTFAEDIAALVQVVV >Mature_294_residues MILSFNRMNKEENMAFDFKNMICFGVAGNFAGHLEQAGEAADFISVQTEEEIQPKAIFPFYVPSETLNPEHQFLATFPLT HDQICFPKQKGADNLQIEPEIALICDIEYQEKQVISLTPRFFTAYNDCSIRRPDAKKISEKKNWGEKTKGLANTLLPLSS FAPGCELDHYHIACFHKRGTDFNEYGIDSPALGYSYFHQKLLNWIITKMNTQPDQGPMNDIPALLAKANYPKQAVIGIGA TRYTAFGERNFLQIGDTSIVVVYNAKKYDHETIVSMAKQNTFAEDIAALVQVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33149; Mature: 33149
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSFNRMNKEENMAFDFKNMICFGVAGNFAGHLEQAGEAADFISVQTEEEIQPKAIFPF CEEECCCCCCCCCCEEEHHHEEEEEECCCHHHHHHHHCCHHHEEEECCCCCCCCCEEEEE YVPSETLNPEHQFLATFPLTHDQICFPKQKGADNLQIEPEIALICDIEYQEKQVISLTPR ECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEECCH FFTAYNDCSIRRPDAKKISEKKNWGEKTKGLANTLLPLSSFAPGCELDHYHIACFHKRGT HHEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC DFNEYGIDSPALGYSYFHQKLLNWIITKMNTQPDQGPMNDIPALLAKANYPKQAVIGIGA CHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC TRYTAFGERNFLQIGDTSIVVVYNAKKYDHETIVSMAKQNTFAEDIAALVQVVV HHEEECCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MILSFNRMNKEENMAFDFKNMICFGVAGNFAGHLEQAGEAADFISVQTEEEIQPKAIFPF CEEECCCCCCCCCCEEEHHHEEEEEECCCHHHHHHHHCCHHHEEEECCCCCCCCCEEEEE YVPSETLNPEHQFLATFPLTHDQICFPKQKGADNLQIEPEIALICDIEYQEKQVISLTPR ECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEECCH FFTAYNDCSIRRPDAKKISEKKNWGEKTKGLANTLLPLSSFAPGCELDHYHIACFHKRGT HHEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC DFNEYGIDSPALGYSYFHQKLLNWIITKMNTQPDQGPMNDIPALLAKANYPKQAVIGIGA CHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC TRYTAFGERNFLQIGDTSIVVVYNAKKYDHETIVSMAKQNTFAEDIAALVQVVV HHEEECCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA