Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
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Accession | NC_002663 |
Length | 2,257,487 |
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The map label for this gene is 15602115
Identifier: 15602115
GI number: 15602115
Start: 280944
End: 281624
Strand: Reverse
Name: 15602115
Synonym: PM0250
Alternate gene names: NA
Gene position: 281624-280944 (Counterclockwise)
Preceding gene: 15602118
Following gene: 15602114
Centisome position: 12.48
GC content: 38.77
Gene sequence:
>681_bases ATGGCACTGAATAATATCCTTGGATTATTTGCACATTCGCCGTTAAAACCCTTACAAAAACATTCAGAGAAAGTGACTGA GTGTTGTAATTTACTTATTCCGTTCTTTGAACATACCTTCCACGGTGAGTGGGATAAAGCGGAAGAACTCCGCGCGAAAA TCTCAGAATGCGAGCGTCAAGCTGATACGTTAAAACGTGAAATCCGTTTGAAACTGCCACGAGGTTTATTTATGCCAATT GATCGTACAGATTTATTGGAATTAGTCACACAACAAGACAAATTAGCTAATTTTGCAAAAGATATTTCAGGTCGTATGAT TGGTCGTCATTTTGCCATTCCTGAAAGTATGCAACCGGAATTTGAAAAATATGTCAAACGCAGCTTAGATGCCATTATCC AAGCTCATCGCGTAATTGATGAAATGGAGCAACTGCTCGAAACCGGTTTTAAAGGGCGCGAATTAGATCTTGTCAATCGC ATGATCAATGAATTAGATGCGATTGAAGATGATACAGATCAAATGCAAATCAAGTTAAGAAAAATGTTACTTGGTTTAGA GTCTCGTTATAATCCAATTGATGTCATGTTCTTGTATAAAACGCTGGAATGGGTTGGGGTCTTAGCGGATCAAGCTCAGC GCGTAGGATCACGAATTGAGTTAATGTTAGCTCGTTCATAA
Upstream 100 bases:
>100_bases AATAAATACTGAACTTTTTCGATTAAAATCGTGAATTTTTAGCTAACATCATGTAATATTCGCCTGAAAAATTAGATCAA TCTCTATTGGGAGTCACCTT
Downstream 100 bases:
>100_bases CCCATCGGTTTTAAGGAAGAACAAAAATGGAACTACTTAATCAATATGGTACTTTGCTCGTTTTTATTACGGCTGCATTT GGTTTTTTCATGGCCTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MALNNILGLFAHSPLKPLQKHSEKVTECCNLLIPFFEHTFHGEWDKAEELRAKISECERQADTLKREIRLKLPRGLFMPI DRTDLLELVTQQDKLANFAKDISGRMIGRHFAIPESMQPEFEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNR MINELDAIEDDTDQMQIKLRKMLLGLESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS
Sequences:
>Translated_226_residues MALNNILGLFAHSPLKPLQKHSEKVTECCNLLIPFFEHTFHGEWDKAEELRAKISECERQADTLKREIRLKLPRGLFMPI DRTDLLELVTQQDKLANFAKDISGRMIGRHFAIPESMQPEFEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNR MINELDAIEDDTDQMQIKLRKMLLGLESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS >Mature_225_residues ALNNILGLFAHSPLKPLQKHSEKVTECCNLLIPFFEHTFHGEWDKAEELRAKISECERQADTLKREIRLKLPRGLFMPID RTDLLELVTQQDKLANFAKDISGRMIGRHFAIPESMQPEFEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNRM INELDAIEDDTDQMQIKLRKMLLGLESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 26295; Mature: 26164
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00392 DDC_GAD_HDC_YDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNNILGLFAHSPLKPLQKHSEKVTECCNLLIPFFEHTFHGEWDKAEELRAKISECERQ CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ADTLKREIRLKLPRGLFMPIDRTDLLELVTQQDKLANFAKDISGRMIGRHFAIPESMQPE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNRMINELDAIEDDTDQMQIKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH KMLLGLESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALNNILGLFAHSPLKPLQKHSEKVTECCNLLIPFFEHTFHGEWDKAEELRAKISECERQ CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ADTLKREIRLKLPRGLFMPIDRTDLLELVTQQDKLANFAKDISGRMIGRHFAIPESMQPE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FEKYVKRSLDAIIQAHRVIDEMEQLLETGFKGRELDLVNRMINELDAIEDDTDQMQIKLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH KMLLGLESRYNPIDVMFLYKTLEWVGVLADQAQRVGSRIELMLARS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]