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The map label for this gene is ygiM [C]

Identifier: 15602113

GI number: 15602113

Start: 278979

End: 279590

Strand: Reverse

Name: ygiM [C]

Synonym: PM0248

Alternate gene names: 15602113

Gene position: 279590-278979 (Counterclockwise)

Preceding gene: 15602114

Following gene: 15602112

Centisome position: 12.39

GC content: 40.69

Gene sequence:

>612_bases
ATGCAAAAAATCGCTAAAGTCTTACTCTCTTGTCTTTTTCTTAGTGTATCCATGCAAGTTGCCTACGCAGAAACCAGATA
TGTCACAGAAAACTTAAGCACATTTTTGCGTAAAGGCGCAGGCGAACAATATAAAATTGCGGGCGCTATCCGAGCAGGCG
AAGCGGTCACGGTTTTAGATCAAAAAGACCGTTATACCTTAATCCGTGATAGCAAAAATCGTGATGCTTGGATCTTAACC
AGTGAGTTAACTTCTACTCCAAGTAGTAAAGAAGAAAATCCTAAGTTAAAGACTCAGATCCAAGAATTGACCATGAAACT
GAACCGCTTAGATAGTGACTGGCAACAACGTACTAGTGAAATGCAGCGTCGTGCTAACCAAGCGGAGCAACAAAGCAGTC
AATTACTTGAACAAAACTCTCAGCTAAAACGTGAGTTAGAAATCACCAAAAATAAAAACCGTGATCTTGAAGCAATGCTA
GATGCGGGTAAACGTGAAATTGCGATCCAATGGTTTATCTATGGTGGTTCTGTTCTCGGTGTGGGTTTATTGTTAGGTTT
GTTAATCCCATTCATTCTACCAAAACGCCGTCGCAATAATGGTTGGGCATAA

Upstream 100 bases:

>100_bases
ATCATTTATTATGTACTTAGCTTTATTTTCCACTAATATGTTATAAAGTGTGGTGCCTAAGCCACACTTTTCATTTTGTT
TTACTATAGGATATTGTTTT

Downstream 100 bases:

>100_bases
CGATCAACGATGAACAACAAGATAAAAATCTATTTAGTTGGAGGTGCTGTGCGAGATCAGCTCCTCAATCTTGTTGTGAA
AGATCGTGATTGGGTCGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQKIAKVLLSCLFLSVSMQVAYAETRYVTENLSTFLRKGAGEQYKIAGAIRAGEAVTVLDQKDRYTLIRDSKNRDAWILT
SELTSTPSSKEENPKLKTQIQELTMKLNRLDSDWQQRTSEMQRRANQAEQQSSQLLEQNSQLKRELEITKNKNRDLEAML
DAGKREIAIQWFIYGGSVLGVGLLLGLLIPFILPKRRRNNGWA

Sequences:

>Translated_203_residues
MQKIAKVLLSCLFLSVSMQVAYAETRYVTENLSTFLRKGAGEQYKIAGAIRAGEAVTVLDQKDRYTLIRDSKNRDAWILT
SELTSTPSSKEENPKLKTQIQELTMKLNRLDSDWQQRTSEMQRRANQAEQQSSQLLEQNSQLKRELEITKNKNRDLEAML
DAGKREIAIQWFIYGGSVLGVGLLLGLLIPFILPKRRRNNGWA
>Mature_203_residues
MQKIAKVLLSCLFLSVSMQVAYAETRYVTENLSTFLRKGAGEQYKIAGAIRAGEAVTVLDQKDRYTLIRDSKNRDAWILT
SELTSTPSSKEENPKLKTQIQELTMKLNRLDSDWQQRTSEMQRRANQAEQQSSQLLEQNSQLKRELEITKNKNRDLEAML
DAGKREIAIQWFIYGGSVLGVGLLLGLLIPFILPKRRRNNGWA

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiM [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=204, Percent_Identity=40.6862745098039, Blast_Score=137, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 23205; Mature: 23205

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIAKVLLSCLFLSVSMQVAYAETRYVTENLSTFLRKGAGEQYKIAGAIRAGEAVTVLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEC
QKDRYTLIRDSKNRDAWILTSELTSTPSSKEENPKLKTQIQELTMKLNRLDSDWQQRTSE
CCCCEEEEECCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
MQRRANQAEQQSSQLLEQNSQLKRELEITKNKNRDLEAMLDAGKREIAIQWFIYGGSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEEEECCHHHH
VGLLLGLLIPFILPKRRRNNGWA
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQKIAKVLLSCLFLSVSMQVAYAETRYVTENLSTFLRKGAGEQYKIAGAIRAGEAVTVLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEC
QKDRYTLIRDSKNRDAWILTSELTSTPSSKEENPKLKTQIQELTMKLNRLDSDWQQRTSE
CCCCEEEEECCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
MQRRANQAEQQSSQLLEQNSQLKRELEITKNKNRDLEAMLDAGKREIAIQWFIYGGSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEEEECCHHHH
VGLLLGLLIPFILPKRRRNNGWA
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]