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The map label for this gene is ybgI [C]

Identifier: 15602048

GI number: 15602048

Start: 206364

End: 207119

Strand: Reverse

Name: ybgI [C]

Synonym: PM0183

Alternate gene names: 15602048

Gene position: 207119-206364 (Counterclockwise)

Preceding gene: 15602049

Following gene: 15602047

Centisome position: 9.17

GC content: 42.2

Gene sequence:

>756_bases
ATGAACGCCCTTGAACTTGAACAGATTTTAAATCACAAACTCAACTCCCAAGCCATCTCTGATTACGCCCCCAATGGTCT
ACAAGTGGAAGGAAAAAAGGACATCAAAAAAATCATTACGGGGGTTACCGCAAGTCAAGCTTTAATTGAGTATGCCGTTA
GTCAAAACGCCGATGCGATTTTGGTTCATCATGGCTATTTTTGGAAAAGTGAAAACCCTTGTATTCGTGGTATGAAAGGG
AAACGTATCAAAACACTCTTAGTCAATGATATCAATTTATATGGTTATCACTTACCATTAGATGTTCATCCTGAATTAGG
TAACAACGCTCGTCTTGCTGCCCTACTAGAGATTGAGGATTTACAGCCCTTAGAACAAGGTACGGTAAGTATTCCCGTTT
ATGGTACCTTAAAAACACCGTTAACCAGCGATGCCTTTGCTGCCCGAATTGAGCAAGTGCTAAAACGTAAACCTCTAGTA
TGCAGCGACAATGCGCCGCACCTTATTCGTACAGTGGGTATTTGTACGGGAGGAGGACAGAGTTATATTGATTTAGCAGC
CAACCAAGGTGTTGATGCCTTCATTAGTGGTGAAGTGTCGGAGCAAACTATCCACTCTGCCCGTGAACAAGGTATTCATT
TTTTTGCAGCAGGTCACCATGCCACAGAACGCTATGGCATAAAAGCCTTAGGCGAATGGCTCAGTCAGCACTATGATCTT
GAGGTGGAATTTAAAGATATTGATAATCCTGCTTAA

Upstream 100 bases:

>100_bases
AAAAAGATGTTCGCATTAGCCATTTTTTTCTTCTTATTCTCGCCTAAATCCTTTACCATGATCCGCATTCAATTTCCCTT
ATTCATCATGAGAAAGACCT

Downstream 100 bases:

>100_bases
GAAAATAGGATATAAGGTCCGCTTTGTATTTATTCACATTTTCCCTTATACTAGCCAGAATTTTTAACATACGAAAAGGT
ATTGATTATGGGTTTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAILVHHGYFWKSENPCIRGMKG
KRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIEDLQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLV
CSDNAPHLIRTVGICTGGGQSYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDL
EVEFKDIDNPA

Sequences:

>Translated_251_residues
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAILVHHGYFWKSENPCIRGMKG
KRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIEDLQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLV
CSDNAPHLIRTVGICTGGGQSYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDL
EVEFKDIDNPA
>Mature_251_residues
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAILVHHGYFWKSENPCIRGMKG
KRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIEDLQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLV
CSDNAPHLIRTVGICTGGGQSYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDL
EVEFKDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=254, Percent_Identity=64.5669291338583, Blast_Score=332, Evalue=1e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y183_PASMU (Q9CP72)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245120.1
- ProteinModelPortal:   Q9CP72
- SMR:   Q9CP72
- GeneID:   1243530
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0183
- NMPDR:   fig|272843.1.peg.183
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- ProtClustDB:   CLSK870002
- BioCyc:   PMUL272843:PM0183-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 27589; Mature: 27589

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAI
CCHHHHHHHHHHCCCCHHHHHCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
LVHHGYFWKSENPCIRGMKGKRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIED
EEECCEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEECEEECCCCCCCCEEEEEEEECC
LQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLVCSDNAPHLIRTVGICTGGGQ
CCHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEECCCC
SYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDL
CEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCE
EVEFKDIDNPA
EEEEECCCCCC
>Mature Secondary Structure
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAI
CCHHHHHHHHHHCCCCHHHHHCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
LVHHGYFWKSENPCIRGMKGKRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIED
EEECCEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEECEEECCCCCCCCEEEEEEEECC
LQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLVCSDNAPHLIRTVGICTGGGQ
CCHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEECCCC
SYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDL
CEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCE
EVEFKDIDNPA
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100