Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is 15594901
Identifier: 15594901
GI number: 15594901
Start: 568270
End: 569139
Strand: Direct
Name: 15594901
Synonym: BB0556
Alternate gene names: NA
Gene position: 568270-569139 (Clockwise)
Preceding gene: 15594900
Following gene: 15594902
Centisome position: 62.4
GC content: 22.76
Gene sequence:
>870_bases ATGGCTAATGTTAAGGTTTATTATCCTGAAAGTTTTAATATACTATCTAATTTATTTAACAAAAATTTAAATAATTATAT CATTTATAATGAGCTGGATTTTAAAAAAAATCCTGATTTGTTTAATAGAGAAACACCCATTGATAATTTTTTTATTGTTG GTAATTTTGAAAAATTTAATAAGGTATCTTTAAGGGGTAATTTTCTTGAGATGGGGCCTTGTGTGACTTACAACGAGATA CTTCGGATTGGTAAGAAAAATATTCCAAGTTTGTTTTATGAATTTATTTCAAAATTTAATGATAAAATATATTTAAATAG TATTAACCTTGCAAATGGGTTTTATTATAAAAACACCGTTTTTGATATTTATCCTTTGTTGATAAGTCTTGATGCTCAAA TTGAGTTTAAAAATGTTTTAACCAAAAAAACTTATGTTTTTAGTGCTTATAATTTAAATAGAGCTGAATATATTGCAAAT CGAAACACTGTTCTTATTACTAAATTTAAATTTCCAATGATGAATTTATGGAACAGAAGCTTTTATCATAAAATATTTTT CAATACTTTGTCTTTTGACATTTTAGAAGAATCGGACATTATTTTTATATGTATTCTTTTAAACATAAAAAGAGACATTA TAAATGATTTTTTGTTAAAGATATTTTATGATGACAAGGTGATAGTCATAAAGGATTTCCAGATTTTACTTTTAAACAAA TCTTTGCCGCTTTCATTTTCTGAGATAGAAAATTCTCTTAAAATGTTGGATAAAAATATAAGAGATTCTAAAAATTTCAA CATAGGAGAGAGAAATTTAAAGCTAATAAAGAATTTTTATTTAGACATATTAATGAGTTTTAATTTTTAA
Upstream 100 bases:
>100_bases TCAGATATTTTAGGCTATAGAAAGTCATTAAAATGTAATTGTATGGATGTTAATACTTTTTTATCTCTTTATTTGAAAGC TGAAGAATTGTATAGAAAAA
Downstream 100 bases:
>100_bases TTGTTAGAATAAGTTTAATTACTATCTTTATTATGCTATATTTCTTATGTAAAGGGAATATATAATTTATTTTTATGTAT TATAATGTAAAAAGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MANVKVYYPESFNILSNLFNKNLNNYIIYNELDFKKNPDLFNRETPIDNFFIVGNFEKFNKVSLRGNFLEMGPCVTYNEI LRIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTVFDIYPLLISLDAQIEFKNVLTKKTYVFSAYNLNRAEYIAN RNTVLITKFKFPMMNLWNRSFYHKIFFNTLSFDILEESDIIFICILLNIKRDIINDFLLKIFYDDKVIVIKDFQILLLNK SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMSFNF
Sequences:
>Translated_289_residues MANVKVYYPESFNILSNLFNKNLNNYIIYNELDFKKNPDLFNRETPIDNFFIVGNFEKFNKVSLRGNFLEMGPCVTYNEI LRIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTVFDIYPLLISLDAQIEFKNVLTKKTYVFSAYNLNRAEYIAN RNTVLITKFKFPMMNLWNRSFYHKIFFNTLSFDILEESDIIFICILLNIKRDIINDFLLKIFYDDKVIVIKDFQILLLNK SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMSFNF >Mature_288_residues ANVKVYYPESFNILSNLFNKNLNNYIIYNELDFKKNPDLFNRETPIDNFFIVGNFEKFNKVSLRGNFLEMGPCVTYNEIL RIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTVFDIYPLLISLDAQIEFKNVLTKKTYVFSAYNLNRAEYIANR NTVLITKFKFPMMNLWNRSFYHKIFFNTLSFDILEESDIIFICILLNIKRDIINDFLLKIFYDDKVIVIKDFQILLLNKS LPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMSFNF
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34464; Mature: 34332
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVKVYYPESFNILSNLFNKNLNNYIIYNELDFKKNPDLFNRETPIDNFFIVGNFEKFN CCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHCC KVSLRGNFLEMGPCVTYNEILRIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTV EEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEECHH FDIYPLLISLDAQIEFKNVLTKKTYVFSAYNLNRAEYIANRNTVLITKFKFPMMNLWNRS HHHHHHHEEECCCEEHHHHHHHHEEEEEEECCCHHHHEECCCEEEEEEECCCHHHHHHHH FYHKIFFNTLSFDILEESDIIFICILLNIKRDIINDFLLKIFYDDKVIVIKDFQILLLNK HHHHHHHHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHEEEECCEEEEEECEEEEEECC SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMSFNF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ANVKVYYPESFNILSNLFNKNLNNYIIYNELDFKKNPDLFNRETPIDNFFIVGNFEKFN CCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHCC KVSLRGNFLEMGPCVTYNEILRIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTV EEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEECHH FDIYPLLISLDAQIEFKNVLTKKTYVFSAYNLNRAEYIANRNTVLITKFKFPMMNLWNRS HHHHHHHEEECCCEEHHHHHHHHEEEEEEECCCHHHHEECCCEEEEEEECCCHHHHHHHH FYHKIFFNTLSFDILEESDIIFICILLNIKRDIINDFLLKIFYDDKVIVIKDFQILLLNK HHHHHHHHHHEEEEECCCCEEEEEEEEHHHHHHHHHHHHEEEECCEEEEEECEEEEEECC SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMSFNF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA