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The map label for this gene is lipB [H]

Identifier: 15594878

GI number: 15594878

Start: 542263

End: 543024

Strand: Direct

Name: lipB [H]

Synonym: BB0533

Alternate gene names: 15594878

Gene position: 542263-543024 (Clockwise)

Preceding gene: 15594874

Following gene: 15594879

Centisome position: 59.54

GC content: 31.76

Gene sequence:

>762_bases
ATGGTTGGAACCTTTTTGGGAACGGGGGCTTCAAGTGGTGTTCCTATGTTAAATTGTAGCTGTAAAGTCTGTACTTCAAG
TTATAGTAAAAATAAAAGATTGAGAAGTTCTTTTTTTCTTGAGTCATCTTCTGGCATCAAATTGTTGATTGATACAGGTC
CTGATATTAGACAGCAACTTTTAAGAGAGAAAATAGATAGGCTTGATTTAGTGCTTTACACGCATGAACATTATGATCAT
ATTATGGGTTTTGATGATATTAAGTTCTATACACGATGTGCCCCTTTAAACATTTATGCTAGAGATACTGCCATGGCTCA
CATAAGGAATGCTTTTCCGTATAATTTTACATCCAAACCCTCTTTAAGTGGAAAGGCAGACATTATTGCCAATGTTATTA
GGGATTTTGAGCCCTTTTTTTTTAAAAGTCTAAAGATAGTGCCAATTCCTTTGATTCATGGGGATATAATTAGTTTAGGT
TATAGGGTAGGCAATTTAGCGTATCTTACTGATGTTAAATTTATTCCCGAAGCGTCTTATGATTATTTAAAAAATTTAGA
TCTACTCATAATAGATGCTATGAGGATTAAGCCTCATCCTGCGCATTTAAATTTTTCAGAGGCTTTTTGTGTAATTAAAA
AGATCAATCCTAAAATTTCTTACTTTACACATATTGCACACGATATAATGCATGAAGAATTTGATTATTTAGAAAAAGAT
AATATCTATTTAGCTTATGATGGATTAAAGATTTATATTTGA

Upstream 100 bases:

>100_bases
TAGATTTAATAAGAGTTGTTTGATTAAGAAAGTTTATTTTTGTTTAATATAAAATGTTGTGTTAAAATAGATTATGTTTA
CAGGCGAAAGGTAGTAACAT

Downstream 100 bases:

>100_bases
TTTAACTTTAGTTAGAGAGGATTTATGAAATTAATTTCATGGAATGTAAATGGAATTAGAGCTGTTTTAAAGAAAGGTTT
TCTTGAGTTTGTAAAAGAAT

Product: phnP protein

Products: NA

Alternate protein names: Lipoate-protein ligase B; Lipoyl/octanoyl transferase; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVGTFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLESSSGIKLLIDTGPDIRQQLLREKIDRLDLVLYTHEHYDH
IMGFDDIKFYTRCAPLNIYARDTAMAHIRNAFPYNFTSKPSLSGKADIIANVIRDFEPFFFKSLKIVPIPLIHGDIISLG
YRVGNLAYLTDVKFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHEEFDYLEKD
NIYLAYDGLKIYI

Sequences:

>Translated_253_residues
MVGTFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLESSSGIKLLIDTGPDIRQQLLREKIDRLDLVLYTHEHYDH
IMGFDDIKFYTRCAPLNIYARDTAMAHIRNAFPYNFTSKPSLSGKADIIANVIRDFEPFFFKSLKIVPIPLIHGDIISLG
YRVGNLAYLTDVKFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHEEFDYLEKD
NIYLAYDGLKIYI
>Mature_253_residues
MVGTFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLESSSGIKLLIDTGPDIRQQLLREKIDRLDLVLYTHEHYDH
IMGFDDIKFYTRCAPLNIYARDTAMAHIRNAFPYNFTSKPSLSGKADIIANVIRDFEPFFFKSLKIVPIPLIHGDIISLG
YRVGNLAYLTDVKFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHEEFDYLEKD
NIYLAYDGLKIYI

Specific function: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the lipB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004143
- InterPro:   IPR000544
- InterPro:   IPR020605 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB; PF00753 Lactamase_B [H]

EC number: =2.3.1.181 [H]

Molecular weight: Translated: 28965; Mature: 28965

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGTFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLESSSGIKLLIDTGPDIRQQL
CCCCEECCCCCCCCEEEECCCEEECCCHHCCHHHHHHHEEECCCCCEEEEECCCHHHHHH
LREKIDRLDLVLYTHEHYDHIMGFDDIKFYTRCAPLNIYARDTAMAHIRNAFPYNFTSKP
HHHHHHHEEEEEEECCHHHHHCCCCCHHHEEEECCEEEEECHHHHHHHHHCCCCCCCCCC
SLSGKADIIANVIRDFEPFFFKSLKIVPIPLIHGDIISLGYRVGNLAYLTDVKFIPEASY
CCCCHHHHHHHHHHHCCHHHHCCEEEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCCH
DYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHEEFDYLEKD
HHHCCCCEEEEEEEECCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
NIYLAYDGLKIYI
CEEEEECCEEEEC
>Mature Secondary Structure
MVGTFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLESSSGIKLLIDTGPDIRQQL
CCCCEECCCCCCCCEEEECCCEEECCCHHCCHHHHHHHEEECCCCCEEEEECCCHHHHHH
LREKIDRLDLVLYTHEHYDHIMGFDDIKFYTRCAPLNIYARDTAMAHIRNAFPYNFTSKP
HHHHHHHEEEEEEECCHHHHHCCCCCHHHEEEECCEEEEECHHHHHHHHHCCCCCCCCCC
SLSGKADIIANVIRDFEPFFFKSLKIVPIPLIHGDIISLGYRVGNLAYLTDVKFIPEASY
CCCCHHHHHHHHHHHCCHHHHCCEEEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCCH
DYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHEEFDYLEKD
HHHCCCCEEEEEEEECCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
NIYLAYDGLKIYI
CEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12949112 [H]