Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is 15594761
Identifier: 15594761
GI number: 15594761
Start: 426736
End: 427950
Strand: Direct
Name: 15594761
Synonym: BB0416
Alternate gene names: NA
Gene position: 426736-427950 (Clockwise)
Preceding gene: 15594760
Following gene: 15594762
Centisome position: 46.86
GC content: 28.48
Gene sequence:
>1215_bases TTGGACAATAAAAAAGAAAACACCGAAACAGAAGACTGTTTTTCTCATGTAAGTAAATTTAATATACACAATAAAACAAT ATACATACTTGGAACTGCTCACGTGTCAAAAAAAAGCTCAGAAGATACTGCAAATTTAATAGAAATCTTAAAACCAGACT ATATTGCCGTTGAACTTGATGAAGCTCGCTATCATTCGATCTTAAATACCAATGAAAATGAAAAATGGAGAAACTTAGAT ATAGATAAAGCATTAAAACAAGGAAAAGCTTTCTTTCTCATAATAAACATAATTCTTAGTAATTTTCAAAAAAAATTAGC AAAAGAACAGGGAATAAAACCTGGTGAAGAAATGAAAACAGCTATTTTAAAAGCTAAAAAACACAATATTCCACTAATTC TTGCTGACAGAAAAATTGAAACAACACTAAAAAGAGCTTGGATATCTATTCCAATATTTGAAAAAGCAAAAATAATCTCA AGCCTTTTTTCCCTAACAGATGCAAAAATTACAAAAGATGAAATTGAAAAACTCAAAGAACAGGACGCTCTTTCAAAAAT AATGGAAGAACTTTCCAAAGAAATACCCAAAGTAAAAAAAGTTTTAATTGACGAAAGAGACGAATTTATTACAAACAAAA TACTTGAAGGAGAGGGCATTATTCTTGCCATTGTGGGTGCAGGCCATGTAAGCGGAATAATGAGAACTTTAAAAGAAATA AGTCAAAATAAAAAAATAATAAACGTTGAAGAACTCGAGAAAATACCTAAAAAACATTTTTCATTTAGCAAAGTGCTATC TTACTTGATTGCAATTTCAATCATTTTACTAATAGTAAGCTCTTTTTACTTTAAAGGATTTGATTTTGCTTACAAAAATT TAAAGCTTTGGATAATATCTAACTCTATTTTTTCAGGCATCGCATCGATTTTATTAAAATCTCATCCCTTAACAATTTTA ACAGCTATTATAGGTTCTCCAATATTCTCCTTAATACCATTCATAGGAACAGGTATGGTAGCAGGGCTTGTTGAAGCTTA TATAAACAAACCAAAAGTCAAAGACTTTGAAAATCTACAAGAAGAATTGTCGACAATAAAAGGATATTTCAAAAACAAAG TTACAAGAATTCTATTAATAGTGATTTTTGTAAACCTTGGATCTACAATTGGAACAATCGTAGGACTTAAATTTTTATTA AATGTTTTCAAATAA
Upstream 100 bases:
>100_bases GGAAAACAATATAGACTATATAGTTCCACTAAGCCATATGGTAAAATTATTAAAAGCTATACTAATTAATAGCTAAATTT TTTTAAACAAGGAATATTTT
Downstream 100 bases:
>100_bases ACCCTTAAAATAACAAATATTTAAACAGGAGTATATATGGGGCTTGTATTTTTAGGTCCTCCGGGTTCTGGAAAGGGGAC TATTTCAAAAATTATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLD IDKALKQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIIS SLFSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGEGIILAIVGAGHVSGIMRTLKEI SQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSIFSGIASILLKSHPLTIL TAIIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTIKGYFKNKVTRILLIVIFVNLGSTIGTIVGLKFLL NVFK
Sequences:
>Translated_404_residues MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLD IDKALKQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIIS SLFSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGEGIILAIVGAGHVSGIMRTLKEI SQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSIFSGIASILLKSHPLTIL TAIIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTIKGYFKNKVTRILLIVIFVNLGSTIGTIVGLKFLL NVFK >Mature_404_residues MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELDEARYHSILNTNENEKWRNLD IDKALKQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKTAILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIIS SLFSLTDAKITKDEIEKLKEQDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGEGIILAIVGAGHVSGIMRTLKEI SQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIISNSIFSGIASILLKSHPLTIL TAIIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQEELSTIKGYFKNKVTRILLIVIFVNLGSTIGTIVGLKFLL NVFK
Specific function: Unknown
COG id: COG1916
COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI33342278, Length=194, Percent_Identity=29.3814432989691, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71988206, Length=240, Percent_Identity=29.1666666666667, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71988217, Length=240, Percent_Identity=29.1666666666667, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24646455, Length=282, Percent_Identity=29.4326241134752, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI21357445, Length=282, Percent_Identity=29.4326241134752, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002816 - InterPro: IPR005230 [H]
Pfam domain/function: PF01963 TraB [H]
EC number: NA
Molecular weight: Translated: 45679; Mature: 45679
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELD CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCHHHHHHHHHCCCEEEEEEC EARYHSILNTNENEKWRNLDIDKALKQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKT HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIISSLFSLTDAKITKDEIEKLKE HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGEGIILAIVGAGHVSGIMRTLKEI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH SQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIIS HHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEC NSIFSGIASILLKSHPLTILTAIIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQ CHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EELSTIKGYFKNKVTRILLIVIFVNLGSTIGTIVGLKFLLNVFK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDNKKENTETEDCFSHVSKFNIHNKTIYILGTAHVSKKSSEDTANLIEILKPDYIAVELD CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCHHHHHHHHHCCCEEEEEEC EARYHSILNTNENEKWRNLDIDKALKQGKAFFLIINIILSNFQKKLAKEQGIKPGEEMKT HHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AILKAKKHNIPLILADRKIETTLKRAWISIPIFEKAKIISSLFSLTDAKITKDEIEKLKE HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QDALSKIMEELSKEIPKVKKVLIDERDEFITNKILEGEGIILAIVGAGHVSGIMRTLKEI HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH SQNKKIINVEELEKIPKKHFSFSKVLSYLIAISIILLIVSSFYFKGFDFAYKNLKLWIIS HHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEC NSIFSGIASILLKSHPLTILTAIIGSPIFSLIPFIGTGMVAGLVEAYINKPKVKDFENLQ CHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EELSTIKGYFKNKVTRILLIVIFVNLGSTIGTIVGLKFLLNVFK HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]