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The map label for this gene is secY

Identifier: 154248695

GI number: 154248695

Start: 5303049

End: 5304383

Strand: Reverse

Name: secY

Synonym: Xaut_4778

Alternate gene names: 154248695

Gene position: 5304383-5303049 (Counterclockwise)

Preceding gene: 154248696

Following gene: 154248694

Centisome position: 99.91

GC content: 62.4

Gene sequence:

>1335_bases
ATGGTCTCGGCGGCGGAACAACTCGCGGCGAACCTCAATTTCGGAGCCCTCGGCAAGGCCGAGGAGCTCAAGAAGCGCAT
CTGGTTCACTCTCGGCGCGCTCATCGTCTATCGGCTGGGCACCTACATCCCCATGCCCGGAATCAATCCGGACGCGCTGG
CTGATGTGTTCAAGAACGCGCAGCAGGGGATCATCGGCCTCTTCAACATGTTCTCGGGCGGCGCCGTGGAGCGCATGGCC
ATCTTCGCCCTGAACATCATGCCGTACATCTCGGCCTCCATCATCATCCAGCTGCTGACCAGCGTCTCGCCGACGCTGGA
GGCGCTGAAGAAGGAAGGCGAGGCGGGCCGCAAGCAGCTCAACCAGTACACCCGCTACCTCACCGTGGTCCTGGCCGTGT
TCCAGGCTTACGGTATCGCGGTGGGCCTGGAAGGCTCGGGCAGCGTGGTGGCCGATCCCGGCTGGTTCTTCCGAATCACC
ACGGTGATCACCCTCACCGGCGGCACCATGTTCCTGATGTGGCTGGGTGAGCAGATCACCTCGCGCGGCATCGGCAACGG
CACCTCACTGATCATCTTCGGCGGCATCGTCGCGGAACTGCCGGGCGCCTTCGTGCGCACCCTTCAGCTCGGCCGTGAAG
GTGCCATCTCCACGCCGCTGATCTTGGCGGCGCTGGTGCTGGCTGTGGTGGTCATCGCGTTCATCGTGTTCATGGAGCGG
GCCCAGCGCAGGCTGCTGATCCAGTATCCCAAGCGCCAGGTGGGCAACCGCATCTATGAGGGCCAGTCCTCGCACCTGCC
CTTGAAGCTGAACACCTCGGGCGTCATCCCCCCGATCTTCGCCTCGTCCCTGCTGCTGATCCCGACCACCATCGCCAGCT
TCCTGCAGGGATCGGGTCCGGAATGGCTGCAGACCATCACCACCCACATCGGGCACGGCCGGCCGGCCTATATGGTGCTC
TATGTGCTGCTGATCGTGTTCTTCTGCTTCTTCTACACCGCGATCGTGTTTAATCCGGTGGAGACGGCGGACAACCTGAA
GAAGCACGGCGGCTTCATTCCCGGCATCCGTCCGGGTGAGCGGACCGCCGAGTACATCGATTATGTGCTCACGCGCATCA
CGGTGGTGGGAGCAGCCTACATTGCGGCGGTTTGCCTCTTCCCCGAACTGCTGATTTCCTACGCCTCGCTTCCGTTCTAT
TTCGGAGGGACATCGCTGCTCATCGTGGTCAGTGTGACCATGGATACGGTGTCCCAGATCCAGGGGCATCTGTTGGCCCA
CCAGTACGAAGGTCTGGTCAAGAAGGCCAAGCTGCGCGGAGGGAGGAGAAGATAA

Upstream 100 bases:

>100_bases
CTGTCGATCCGCATTGATCGGATCCGCGCACTAGGCACCCGCGAATCGCGCCCTCATATAAGGGCTGCCCCAAACCGGGC
GGCGTCCAGCGGAGCAAGGC

Downstream 100 bases:

>100_bases
TATGAGGCTGGTGCTGCTCGGGCCGCCCGGGGCGGGTAAGGGAACCCAGGCACAACGGCTGGTCGCCCGTCATGGGATCG
TCCAGCTCTCCACCGGCGAC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MVSAAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIIQLLTSVSPTLEALKKEGEAGRKQLNQYTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRIT
TVITLTGGTMFLMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLQLGREGAISTPLILAALVLAVVVIAFIVFMER
AQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGSGPEWLQTITTHIGHGRPAYMVL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKAKLRGGRRR

Sequences:

>Translated_444_residues
MVSAAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIIQLLTSVSPTLEALKKEGEAGRKQLNQYTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRIT
TVITLTGGTMFLMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLQLGREGAISTPLILAALVLAVVVIAFIVFMER
AQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGSGPEWLQTITTHIGHGRPAYMVL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKAKLRGGRRR
>Mature_444_residues
MVSAAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIIQLLTSVSPTLEALKKEGEAGRKQLNQYTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRIT
TVITLTGGTMFLMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLQLGREGAISTPLILAALVLAVVVIAFIVFMER
AQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGSGPEWLQTITTHIGHGRPAYMVL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKAKLRGGRRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=434, Percent_Identity=57.3732718894009, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48300; Mature: 48300

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQGIIGLFNMFSGGAVERMAIFALNIMPYISASIIIQLLTSVSPTLEALKKEGEAGRKQL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRITTVITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHCEEEEECCCCCEEECCCHHEEEEHHEEECCCHHHHHHHHHHHH
SRGIGNGTSLIIFGGIVAELPGAFVRTLQLGREGAISTPLILAALVLAVVVIAFIVFMER
HCCCCCCCEEEEECHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGSGP
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
EWLQTITTHIGHGRPAYMVLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
RTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFYFGGTSLLIVVSVTMDTVSQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEHHHHHHHHH
QGHLLAHQYEGLVKKAKLRGGRRR
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSAAEQLAANLNFGALGKAEELKKRIWFTLGALIVYRLGTYIPMPGINPDALADVFKNA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQGIIGLFNMFSGGAVERMAIFALNIMPYISASIIIQLLTSVSPTLEALKKEGEAGRKQL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHH
NQYTRYLTVVLAVFQAYGIAVGLEGSGSVVADPGWFFRITTVITLTGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHCEEEEECCCCCEEECCCHHEEEEHHEEECCCHHHHHHHHHHHH
SRGIGNGTSLIIFGGIVAELPGAFVRTLQLGREGAISTPLILAALVLAVVVIAFIVFMER
HCCCCCCCEEEEECHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRIYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGSGP
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
EWLQTITTHIGHGRPAYMVLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
RTAEYIDYVLTRITVVGAAYIAAVCLFPELLISYASLPFYFGGTSLLIVVSVTMDTVSQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEEEHHHHHHHHH
QGHLLAHQYEGLVKKAKLRGGRRR
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA