Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ppaX [H]
Identifier: 154248680
GI number: 154248680
Start: 5287940
End: 5288668
Strand: Reverse
Name: ppaX [H]
Synonym: Xaut_4762
Alternate gene names: 154248680
Gene position: 5288668-5287940 (Counterclockwise)
Preceding gene: 154248681
Following gene: 154248679
Centisome position: 99.62
GC content: 70.64
Gene sequence:
>729_bases ATGACCCCACCCGAGAGCGACGCCGAGCCCGCCCCCGATGCCGCGCCCCTGAAGCTGGTGCTGTTCGATTGCGACGGCAC GCTGGTGGACAGCCAGCACATGATCGTCGCCGCCATGCGCGACGCCCATGCGGCCCACGGCGTGCCGCTGCCGGGACGGG ACCGGTTGCTCTCGGTGGTGGGGCTTTCCCTGCCGGAGGCCTTTGCCATGCTCTCGCAGGGTGACCTCGCCTATCCCATC GAGGCGCTGGTGGACGCTTATCGCAATGCCTTCACCCGGCTACGCAATGCCGAGCCGCCCGAGCCCATGTTCGACGGCGC CTGGGAGGTGCTGGACACCCTGCGCCGGCGCGACGACGTGGTGCTGGGCATGGTCACCGGCAAGGCGCGGCGCGGGGTGG ACCGGGTGCTCAAGGCCCATGACATGGAAGGCTGGTTCGCCACCATCCAGACCGCCGACGACGCCCCCTCCAAGCCCCAT CCGGCCATGGTGTTCCAGGCCATGAAGGAGATCGGCGCGCGCCCGGAGGAGACGGTGGTGGTCGGCGACACCACCTATGA CGTCTCCATGGCGCTGCAGGCGGGGGCCTCCGCCCTCGGCGTCGGCTGGGGCTATCACGAGGTGGCGGCGCTGGAGCGGG CCGGGGCGGACCATATCGTCCACCGGTTCGACGAGGTGCCCGCCGCCATCTTCGATCTTCTGGCGCGCCGTCGCGCCATC GCCGGATAG
Upstream 100 bases:
>100_bases CCAAGCAGTGCGAGCAGCGGGGCTTCCGCCAGGTCCTGTTCGTGGACCCGTCGGACATCACATGGGTATATGATGTGGCG ACCCAGCAGATGACCCAGAA
Downstream 100 bases:
>100_bases GAGGCGGATCATGGGTGATCCCTCAGGGGCCGATCCCGCCGGCCCCCAGACCATGCGCGATTTCCTGGAGGGCATCGAGG AGCCGGTGGCGGGGGACGAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTPPESDAEPAPDAAPLKLVLFDCDGTLVDSQHMIVAAMRDAHAAHGVPLPGRDRLLSVVGLSLPEAFAMLSQGDLAYPI EALVDAYRNAFTRLRNAEPPEPMFDGAWEVLDTLRRRDDVVLGMVTGKARRGVDRVLKAHDMEGWFATIQTADDAPSKPH PAMVFQAMKEIGARPEETVVVGDTTYDVSMALQAGASALGVGWGYHEVAALERAGADHIVHRFDEVPAAIFDLLARRRAI AG
Sequences:
>Translated_242_residues MTPPESDAEPAPDAAPLKLVLFDCDGTLVDSQHMIVAAMRDAHAAHGVPLPGRDRLLSVVGLSLPEAFAMLSQGDLAYPI EALVDAYRNAFTRLRNAEPPEPMFDGAWEVLDTLRRRDDVVLGMVTGKARRGVDRVLKAHDMEGWFATIQTADDAPSKPH PAMVFQAMKEIGARPEETVVVGDTTYDVSMALQAGASALGVGWGYHEVAALERAGADHIVHRFDEVPAAIFDLLARRRAI AG >Mature_241_residues TPPESDAEPAPDAAPLKLVLFDCDGTLVDSQHMIVAAMRDAHAAHGVPLPGRDRLLSVVGLSLPEAFAMLSQGDLAYPIE ALVDAYRNAFTRLRNAEPPEPMFDGAWEVLDTLRRRDDVVLGMVTGKARRGVDRVLKAHDMEGWFATIQTADDAPSKPHP AMVFQAMKEIGARPEETVVVGDTTYDVSMALQAGASALGVGWGYHEVAALERAGADHIVHRFDEVPAAIFDLLARRRAIA G
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 26129; Mature: 25998
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPESDAEPAPDAAPLKLVLFDCDGTLVDSQHMIVAAMRDAHAAHGVPLPGRDRLLSVV CCCCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH GLSLPEAFAMLSQGDLAYPIEALVDAYRNAFTRLRNAEPPEPMFDGAWEVLDTLRRRDDV HCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCE VLGMVTGKARRGVDRVLKAHDMEGWFATIQTADDAPSKPHPAMVFQAMKEIGARPEETVV EEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEE VGDTTYDVSMALQAGASALGVGWGYHEVAALERAGADHIVHRFDEVPAAIFDLLARRRAI ECCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC AG CC >Mature Secondary Structure TPPESDAEPAPDAAPLKLVLFDCDGTLVDSQHMIVAAMRDAHAAHGVPLPGRDRLLSVV CCCCCCCCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH GLSLPEAFAMLSQGDLAYPIEALVDAYRNAFTRLRNAEPPEPMFDGAWEVLDTLRRRDDV HCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCE VLGMVTGKARRGVDRVLKAHDMEGWFATIQTADDAPSKPHPAMVFQAMKEIGARPEETVV EEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEE VGDTTYDVSMALQAGASALGVGWGYHEVAALERAGADHIVHRFDEVPAAIFDLLARRRAI ECCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA