Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248679
Identifier: 154248679
GI number: 154248679
Start: 5287111
End: 5287929
Strand: Reverse
Name: 154248679
Synonym: Xaut_4761
Alternate gene names: NA
Gene position: 5287929-5287111 (Counterclockwise)
Preceding gene: 154248680
Following gene: 154248678
Centisome position: 99.6
GC content: 71.79
Gene sequence:
>819_bases ATGGGTGATCCCTCAGGGGCCGATCCCGCCGGCCCCCAGACCATGCGCGATTTCCTGGAGGGCATCGAGGAGCCGGTGGC GGGGGACGATCCCATCGCCCGGGCCCGCGCCGCCCAGCGCACGCCGCTGCCGAAACGCTTCTATACCGATGTCAGCGTCG GCGAGGCGGACGGCGGCTTCACCATCCTGCTCGACGGCCGGCCCGTACGCACCCCCGCGCGCGGCCTGCTGCTGGCGCCC ACGCGCCCGCTGGCCGAGGCCATGGCTGCCGAATGGGCGGAGCAGGAGAAGGAGATCAACCCCTTCTTCATGCCGCTGAC GCGCCTCGTGAACGTCGCCCTCGACCGGGTGGGGCCGGAGGCAGAGGCGGTGCGCGAGGAGGTGGTGCGCTATGCCGGCT CCGACATGCTGTTCTACCGGGCCGACAGCCCGCAGACGCTGGTGAAGCGGCAGGCAGAGCAGTGGGACCCGGTGCTCGAC TGGTTGAGCGGCGCCCACGATGCCCGTTTCTTTCTGTCGGAAGGTATTCGCCACGTCACCCAGCCGGACACCTCGCTGGA GCGGGTGCGGGCGCTGGTGCCGCAGGCGCCGCTGAAGCTTGCTGCCGTGCATTCCATCACCACCCTCACCGGCTCCGCCC TGCTGGCGCTGGCGGTGGCGGAAGGCGCGCTCGACGCGGATGCCGCCTGGGCCGCCGCCCATGTGGACGAGGACTTCAAC CGCGAGCAGTGGGGCGAGGACGAGATCGCCACCGCCCGCCGCGCCGCGCGCCGCACCGAGATGGACGCGGCTGCCCGGCT TCTCACGCTGATCACCTGA
Upstream 100 bases:
>100_bases GCCGGGGCGGACCATATCGTCCACCGGTTCGACGAGGTGCCCGCCGCCATCTTCGATCTTCTGGCGCGCCGTCGCGCCAT CGCCGGATAGGAGGCGGATC
Downstream 100 bases:
>100_bases TCGGGACGGCTGCCGGCGACGCCGGCGGCCAAAATCAGGGGGATCGGAACAGGTCTGGAATAGGGGATGGACGAGGACAC CATCGCCGACCTCTTCAGCG
Product: ATP12 ATPase
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGDPSGADPAGPQTMRDFLEGIEEPVAGDDPIARARAAQRTPLPKRFYTDVSVGEADGGFTILLDGRPVRTPARGLLLAP TRPLAEAMAAEWAEQEKEINPFFMPLTRLVNVALDRVGPEAEAVREEVVRYAGSDMLFYRADSPQTLVKRQAEQWDPVLD WLSGAHDARFFLSEGIRHVTQPDTSLERVRALVPQAPLKLAAVHSITTLTGSALLALAVAEGALDADAAWAAAHVDEDFN REQWGEDEIATARRAARRTEMDAAARLLTLIT
Sequences:
>Translated_272_residues MGDPSGADPAGPQTMRDFLEGIEEPVAGDDPIARARAAQRTPLPKRFYTDVSVGEADGGFTILLDGRPVRTPARGLLLAP TRPLAEAMAAEWAEQEKEINPFFMPLTRLVNVALDRVGPEAEAVREEVVRYAGSDMLFYRADSPQTLVKRQAEQWDPVLD WLSGAHDARFFLSEGIRHVTQPDTSLERVRALVPQAPLKLAAVHSITTLTGSALLALAVAEGALDADAAWAAAHVDEDFN REQWGEDEIATARRAARRTEMDAAARLLTLIT >Mature_271_residues GDPSGADPAGPQTMRDFLEGIEEPVAGDDPIARARAAQRTPLPKRFYTDVSVGEADGGFTILLDGRPVRTPARGLLLAPT RPLAEAMAAEWAEQEKEINPFFMPLTRLVNVALDRVGPEAEAVREEVVRYAGSDMLFYRADSPQTLVKRQAEQWDPVLDW LSGAHDARFFLSEGIRHVTQPDTSLERVRALVPQAPLKLAAVHSITTLTGSALLALAVAEGALDADAAWAAAHVDEDFNR EQWGEDEIATARRAARRTEMDAAARLLTLIT
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=208, Percent_Identity=29.8076923076923, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71995783, Length=229, Percent_Identity=28.3842794759825, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24585626, Length=217, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29644; Mature: 29512
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDPSGADPAGPQTMRDFLEGIEEPVAGDDPIARARAAQRTPLPKRFYTDVSVGEADGGF CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCE TILLDGRPVRTPARGLLLAPTRPLAEAMAAEWAEQEKEINPFFMPLTRLVNVALDRVGPE EEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH AEAVREEVVRYAGSDMLFYRADSPQTLVKRQAEQWDPVLDWLSGAHDARFFLSEGIRHVT HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC QPDTSLERVRALVPQAPLKLAAVHSITTLTGSALLALAVAEGALDADAAWAAAHVDEDFN CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHCC REQWGEDEIATARRAARRTEMDAAARLLTLIT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDPSGADPAGPQTMRDFLEGIEEPVAGDDPIARARAAQRTPLPKRFYTDVSVGEADGGF CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCE TILLDGRPVRTPARGLLLAPTRPLAEAMAAEWAEQEKEINPFFMPLTRLVNVALDRVGPE EEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH AEAVREEVVRYAGSDMLFYRADSPQTLVKRQAEQWDPVLDWLSGAHDARFFLSEGIRHVT HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC QPDTSLERVRALVPQAPLKLAAVHSITTLTGSALLALAVAEGALDADAAWAAAHVDEDFN CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHCC REQWGEDEIATARRAARRTEMDAAARLLTLIT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA