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The map label for this gene is rfaQ [C]

Identifier: 154248653

GI number: 154248653

Start: 5255774

End: 5256988

Strand: Reverse

Name: rfaQ [C]

Synonym: Xaut_4735

Alternate gene names: 154248653

Gene position: 5256988-5255774 (Counterclockwise)

Preceding gene: 154248656

Following gene: 154248652

Centisome position: 99.02

GC content: 69.63

Gene sequence:

>1215_bases
ATGAAGCTGCGTGATCTTCTGCGTGGAGGCAAACCGAAGAAGCCCCGCGTTCCGCCGCTGGGCGCGCCGGCGGCTCAGGT
GTGGACAAGCCCGTCGACCACGCTGCGCAGGCTTGGCCCATCCCCCTCCATTCTGGTGGTGAAGCTCGACCATATCGGCG
ATTTCATCACCGCTTTGCCAGCCGTGAAGCGGCTTCAGGCGGCGTTTCCCACCTCGGCCGTATCCTTGCTGTGCGCGCCG
TTCGTGGCGGATCTCGCGCGCTCCACGGGTCTGTTCGCGGCGGTCTACAGCTTCGACTTCTTCGGCGCCCGCATGCAGGA
GCCACGCCCAGCCAACGCCGACGACGTGAGCGAACTCAAGGCGATGGGGCTGCCGGTCCACGACATCGTCATCGACCTGA
GGCAGTCGGACGAGGCGCGGGCGCTGCTCTGGGGCCTCGACGCCAAGGTCCGCGTCGGCTTCGGCGACCCGGTCAATCCC
TTTCCCCTCGACATCGCGCTGCCGGAGCTGGAACGCAGCATGCGGCGCAAGCCGTGGCGGGCCATGACTCATTCCTCCAC
CCAACTGGTGCTGCTGGTGGAGGCGCTGGTGCACGCCCGCGACATGGGCGGCGAGACCGTGCACTTCGCGAGCGGCGCCG
TTGCGGCCGGGGAGACGCAGAATTGCGTCATCCTTGCGCCGGGAACGCGGCTCGGCATCAAGGGCTGGACCGCGGAGGGC
TGGCTCGGCCTCGCCTCTGCCATCGTGGAGCGCACCGGTCTCGACATCGCCGTCATCGGGCGGGGGGAGGAGGCCGAAAC
GGCGGCGCAGATGGCAAAGCTGCTGCCAAAAGGGCGGCTACGGGATTTCGTGGGGCAGGTGGACCTGGCCGACCTGCCGG
CATTGATGCGACCCGCCGCCGCCTTCGTCGGGGTGGATACCGGCACCACCCACCTCGCAGCTTCGCTGGGGGTGCCCACC
GTCGCCCTCTTCTCCGGCTTTGCCGATATCCGGGTCTGGGCCCCCATCGGCCCGGCCACCGTGGTGGTGCACGCCGGCGC
CGGCTGCGCGCCCTGCACGTTGCCGACCGAGAGCCTGTGCCCCTACCAGCGCCGGTGCATGAGCGTGATCGATCCCGAGG
CGGTGCTCGCGGCCATGTCCGGCGTCGCCGCCCATCCCGAGCTGAAGCGCCTTGCCGCCGCGCCGCAGCCTGAGCTTGTG
TTCGCGGCCTCCTGA

Upstream 100 bases:

>100_bases
CACCACGCAAGAATGCCATACTGCCCGCCGTGGCGTTTTCGGGCTAAGACCGGTGCGCTTCGCTCGTGCCATCCTGTGAT
GTTCGCCCGGACCTGCCGTC

Downstream 100 bases:

>100_bases
AGGCAGGAAGACCGGGCCGGCCGTGAACTGCCGGCTGGATCGATGTCCGTTCGCCGTCGCTCACGGCAATCGATCCTGGA
TTTGTGTCGATGCGTCTTCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Heptosyltransferase Family Protein; Lipopolysaccharide Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase I; Lipopolysaccharide Heptosyltransferase III; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Core Biosynthesis Protein Rfaq; Lipopolysaccharide Heptosyltransferase; LPS Biosynthesis Related Glycosyltransferase; Heptosyl Transferase I; LPS Core Biosynthesis Protein; Family 9 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKLRDLLRGGKPKKPRVPPLGAPAAQVWTSPSTTLRRLGPSPSILVVKLDHIGDFITALPAVKRLQAAFPTSAVSLLCAP
FVADLARSTGLFAAVYSFDFFGARMQEPRPANADDVSELKAMGLPVHDIVIDLRQSDEARALLWGLDAKVRVGFGDPVNP
FPLDIALPELERSMRRKPWRAMTHSSTQLVLLVEALVHARDMGGETVHFASGAVAAGETQNCVILAPGTRLGIKGWTAEG
WLGLASAIVERTGLDIAVIGRGEEAETAAQMAKLLPKGRLRDFVGQVDLADLPALMRPAAAFVGVDTGTTHLAASLGVPT
VALFSGFADIRVWAPIGPATVVVHAGAGCAPCTLPTESLCPYQRRCMSVIDPEAVLAAMSGVAAHPELKRLAAAPQPELV
FAAS

Sequences:

>Translated_404_residues
MKLRDLLRGGKPKKPRVPPLGAPAAQVWTSPSTTLRRLGPSPSILVVKLDHIGDFITALPAVKRLQAAFPTSAVSLLCAP
FVADLARSTGLFAAVYSFDFFGARMQEPRPANADDVSELKAMGLPVHDIVIDLRQSDEARALLWGLDAKVRVGFGDPVNP
FPLDIALPELERSMRRKPWRAMTHSSTQLVLLVEALVHARDMGGETVHFASGAVAAGETQNCVILAPGTRLGIKGWTAEG
WLGLASAIVERTGLDIAVIGRGEEAETAAQMAKLLPKGRLRDFVGQVDLADLPALMRPAAAFVGVDTGTTHLAASLGVPT
VALFSGFADIRVWAPIGPATVVVHAGAGCAPCTLPTESLCPYQRRCMSVIDPEAVLAAMSGVAAHPELKRLAAAPQPELV
FAAS
>Mature_404_residues
MKLRDLLRGGKPKKPRVPPLGAPAAQVWTSPSTTLRRLGPSPSILVVKLDHIGDFITALPAVKRLQAAFPTSAVSLLCAP
FVADLARSTGLFAAVYSFDFFGARMQEPRPANADDVSELKAMGLPVHDIVIDLRQSDEARALLWGLDAKVRVGFGDPVNP
FPLDIALPELERSMRRKPWRAMTHSSTQLVLLVEALVHARDMGGETVHFASGAVAAGETQNCVILAPGTRLGIKGWTAEG
WLGLASAIVERTGLDIAVIGRGEEAETAAQMAKLLPKGRLRDFVGQVDLADLPALMRPAAAFVGVDTGTTHLAASLGVPT
VALFSGFADIRVWAPIGPATVVVHAGAGCAPCTLPTESLCPYQRRCMSVIDPEAVLAAMSGVAAHPELKRLAAAPQPELV
FAAS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42663; Mature: 42663

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00699 NITROGENASE_1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRDLLRGGKPKKPRVPPLGAPAAQVWTSPSTTLRRLGPSPSILVVKLDHIGDFITALP
CCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCEEEEEEHHHHHHHHHHH
AVKRLQAAFPTSAVSLLCAPFVADLARSTGLFAAVYSFDFFGARMQEPRPANADDVSELK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
AMGLPVHDIVIDLRQSDEARALLWGLDAKVRVGFGDPVNPFPLDIALPELERSMRRKPWR
HHCCCHHHHHEECCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEECHHHHHHHHCCCHH
AMTHSSTQLVLLVEALVHARDMGGETVHFASGAVAAGETQNCVILAPGTRLGIKGWTAEG
HHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEECCCCEECCCCCCCHH
WLGLASAIVERTGLDIAVIGRGEEAETAAQMAKLLPKGRLRDFVGQVDLADLPALMRPAA
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCHH
AFVGVDTGTTHLAASLGVPTVALFSGFADIRVWAPIGPATVVVHAGAGCAPCTLPTESLC
HEEECCCCCHHHHHHCCCCHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHCC
PYQRRCMSVIDPEAVLAAMSGVAAHPELKRLAAAPQPELVFAAS
HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MKLRDLLRGGKPKKPRVPPLGAPAAQVWTSPSTTLRRLGPSPSILVVKLDHIGDFITALP
CCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCEEEEEEHHHHHHHHHHH
AVKRLQAAFPTSAVSLLCAPFVADLARSTGLFAAVYSFDFFGARMQEPRPANADDVSELK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
AMGLPVHDIVIDLRQSDEARALLWGLDAKVRVGFGDPVNPFPLDIALPELERSMRRKPWR
HHCCCHHHHHEECCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEECHHHHHHHHCCCHH
AMTHSSTQLVLLVEALVHARDMGGETVHFASGAVAAGETQNCVILAPGTRLGIKGWTAEG
HHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEECCCCEECCCCCCCHH
WLGLASAIVERTGLDIAVIGRGEEAETAAQMAKLLPKGRLRDFVGQVDLADLPALMRPAA
HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCHH
AFVGVDTGTTHLAASLGVPTVALFSGFADIRVWAPIGPATVVVHAGAGCAPCTLPTESLC
HEEECCCCCHHHHHHCCCCHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHCC
PYQRRCMSVIDPEAVLAAMSGVAAHPELKRLAAAPQPELVFAAS
HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA