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The map label for this gene is kstR2 [H]

Identifier: 154248629

GI number: 154248629

Start: 5224536

End: 5225222

Strand: Reverse

Name: kstR2 [H]

Synonym: Xaut_4711

Alternate gene names: 154248629

Gene position: 5225222-5224536 (Counterclockwise)

Preceding gene: 154248632

Following gene: 154248617

Centisome position: 98.42

GC content: 68.56

Gene sequence:

>687_bases
GTGCCGGTGGCCGAGACCGCGCCGGAGACCGCACCCCTGCCGCCCCGCCGTCGCGGGCGCCCGCCCAAGATCGCGGGGCC
TGGCGGCGCCGCCGCGCGGCTGGGCCGGCCGCCGCTCATGGCAGACCCGCGCGCGGAAATCCTGCGCCAGGCGGCGCAGC
TGTTCGCGCAGAAGGGCTATGTGGAAAGCTCGCTCAACGAGCTGGCCGCCGCCATGAACTATTCCAAGGGCGCCATCTAC
AATTACTTCTCCTCCAAGCAGGAGATCTACGATGCCATCATCATCTTCACCCTGACCGGCCTCTACGAAACCGGCGCCAA
GGCTGTGAACGAGGCCGATCCGCCGGTGGAGCGCCTCAAGCAGTTCATGATGGCCCACGCCCGCTTCCTGGCGGACAATT
ACGATTGCTTCGTCACCATGCTGGTGGGGTTCTCCGGCATGGCCAACAGCGGCCTCAAGGACGATGCCCTCGCCCTGCGC
GATGCCCATGAGGGCCTGCTGCGGCGGATCCTCCAGGACGGCGTCGCGGACGGCTCGTTCCGGGAGGTGAGCGCCGCGAT
GACCGGCCGCGCGGTGCTCTCGCTGCTGAGCTGGATGGTCCGCTGGTTCAAGCCCGACGGCGGCAAATCCGCCGAGGAGG
TGGCACTGGAGTATCACGACCTGCTGGTGCGCGGCCTGATGGCCTGA

Upstream 100 bases:

>100_bases
CGGCCGGTGAGCGCGGGCTCCATTTACATTCCATCCAGTCGGTATATAATTATCTCGCCTCAGTCAAGGGAGCGGACCGC
TGCAGGACGAACTGAAAAAA

Downstream 100 bases:

>100_bases
GGGCGCTGAAATGAACAAGGCCCGCGGGGATGCCGCGGGCCTTGTTGCGTTCTGGAACCGTGCGAGCGATCACGCCGCGC
AGGACAGGAAGCCGTCCTCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MPVAETAPETAPLPPRRRGRPPKIAGPGGAAARLGRPPLMADPRAEILRQAAQLFAQKGYVESSLNELAAAMNYSKGAIY
NYFSSKQEIYDAIIIFTLTGLYETGAKAVNEADPPVERLKQFMMAHARFLADNYDCFVTMLVGFSGMANSGLKDDALALR
DAHEGLLRRILQDGVADGSFREVSAAMTGRAVLSLLSWMVRWFKPDGGKSAEEVALEYHDLLVRGLMA

Sequences:

>Translated_228_residues
MPVAETAPETAPLPPRRRGRPPKIAGPGGAAARLGRPPLMADPRAEILRQAAQLFAQKGYVESSLNELAAAMNYSKGAIY
NYFSSKQEIYDAIIIFTLTGLYETGAKAVNEADPPVERLKQFMMAHARFLADNYDCFVTMLVGFSGMANSGLKDDALALR
DAHEGLLRRILQDGVADGSFREVSAAMTGRAVLSLLSWMVRWFKPDGGKSAEEVALEYHDLLVRGLMA
>Mature_227_residues
PVAETAPETAPLPPRRRGRPPKIAGPGGAAARLGRPPLMADPRAEILRQAAQLFAQKGYVESSLNELAAAMNYSKGAIYN
YFSSKQEIYDAIIIFTLTGLYETGAKAVNEADPPVERLKQFMMAHARFLADNYDCFVTMLVGFSGMANSGLKDDALALRD
AHEGLLRRILQDGVADGSFREVSAAMTGRAVLSLLSWMVRWFKPDGGKSAEEVALEYHDLLVRGLMA

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24835; Mature: 24704

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVAETAPETAPLPPRRRGRPPKIAGPGGAAARLGRPPLMADPRAEILRQAAQLFAQKGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCH
VESSLNELAAAMNYSKGAIYNYFSSKQEIYDAIIIFTLTGLYETGAKAVNEADPPVERLK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QFMMAHARFLADNYDCFVTMLVGFSGMANSGLKDDALALRDAHEGLLRRILQDGVADGSF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
REVSAAMTGRAVLSLLSWMVRWFKPDGGKSAEEVALEYHDLLVRGLMA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVAETAPETAPLPPRRRGRPPKIAGPGGAAARLGRPPLMADPRAEILRQAAQLFAQKGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCH
VESSLNELAAAMNYSKGAIYNYFSSKQEIYDAIIIFTLTGLYETGAKAVNEADPPVERLK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QFMMAHARFLADNYDCFVTMLVGFSGMANSGLKDDALALRDAHEGLLRRILQDGVADGSF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
REVSAAMTGRAVLSLLSWMVRWFKPDGGKSAEEVALEYHDLLVRGLMA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA