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The map label for this gene is bepC [H]

Identifier: 154248155

GI number: 154248155

Start: 4695828

End: 4697219

Strand: Direct

Name: bepC [H]

Synonym: Xaut_4235

Alternate gene names: 154248155

Gene position: 4695828-4697219 (Clockwise)

Preceding gene: 154248154

Following gene: 154248156

Centisome position: 88.45

GC content: 68.39

Gene sequence:

>1392_bases
ATGTCGGTTGCGAGACTCGTTCGCCGAAACGGATATGCAATTTTGGCGGGGGCCAGCATCATCGTCCTCGGCATGGGGAG
CGCGTCCGCACAGTCTCTCGACGCTGCGCTCGCCATGGCTTACGTCAACAACCCCACGCTGAATTCGGCGCGTGCCGGTA
CGCGGGCGGTGGACGAGAAGGTGCCGCAGGCCCTCTCCGGCTATCGGCCGACCCTCGGCGCCTCGGCGTCGGCGGGGCCT
GAGGCCTACCGCTACCAGCCCACCGGCACCACCGCCTCCAGCGGCAATGCCTGGCCACGCCAGTTCGCCCTGACGGCGGC
CTACACCCTGTTCAACGGCTTCATCACCGGCAACCAGACCCGTACCGCCGAATCGCAGGTGCGGGGCCAGCGGGAGACGC
TCCGCAACACCGAGCAGACGGTGCTGCTGAACGGCGTGACGGCCTATATGAACGTGATCCAGGCCATCGCGCTCCTCGAC
CTCCAGCGGCAGAGCCTCGCCGCGTTCGAGCAGGAATTGCGCGCCACCCGAGACCGCTTCAACGTGGGCGAGGTGACCCG
CACCGACGTGGCCCAGGCGGAGGCGCGTGTCGCCGACGCGCAGTATCAGGTGAGCCAGGCGGTGGCGAACCTGTCCTCGG
CCCGGGCGGTGTACCGGCAGGTGATCGGCGTCGAGCCGGGCAAGCTGTTCACGCCGCGCTCCATCGAGGGCATGCTGCCC
CCCAAGGTGGATCGCGTGATTTCGGGCGGGCTGAGCCAGCATCCCGCCATCAAGGCATCTGAATTCGCCGTGGATGCGGC
GGTGTTCCAGGTGAAGGTCGCCGAAGGCGCGCTGATGCCGAACCTGAGCCTGCAGGGCCAGCTTCAGCAGTCCTACGATT
CGAGCATCGGCGTGGAGCGGGTCGGGACCGCTGCGGCGACCCTTAACCTGTCGGTGCCGATCTACCAGGGCGGCGTGGAG
TACGCGAACATCCGCCAGGCGAAGGAGCTACTGTCGCAGGCGCGGATCGACGTGGACGTGAACCGCGACGCCATCCGCGC
CCAGGCGGTCCAGTTCTGGGGCGCGCTGGAAGCGGCCAAGGTGCAGATCCAGGCCGCGCAGGCCTCGGTCGCCGCCAACA
CCCTGGCGCTGGAAGGCGTGCGCGAGGAGTGGCGTGTTGGCCAGCGCACCACCACCGACGTGCTGAACGCCCAGCGCGAT
CTCACCAACTCCCAGTCCGCCCTCGTGGTGGCGCAGCGTGACCGCGTGGTGGCGGCCTATTCGCTCGTCTCCATCATCGG
CCGGCTCGATGCGGTGTCGCTGGGGCTGAAGGTGGACGTGTACAATCCCCAGGTGCACTACAATCAGGTGCGCGACAGCT
GGGCCGGCGTCCGCACGCCCGACGGGAAGTAG

Upstream 100 bases:

>100_bases
GGTTCCCGATCGCGAGCGGTGCAGATATCTTTCGAGAAAGTTACCGCGCGGCAGAGTCGCTGCAGCATGTCTGCATGCCG
CGTCGGACCGGGAGATTGGG

Downstream 100 bases:

>100_bases
CCCTCAAAATAACGCTGAATTGGGGTGTGCCGGGCTCTTTTGCAGCCCGGTTCCAGGGTGAATACTTGACATCGCGTTTG
GCGATTCTCGCCCACCGGTG

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSVARLVRRNGYAILAGASIIVLGMGSASAQSLDAALAMAYVNNPTLNSARAGTRAVDEKVPQALSGYRPTLGASASAGP
EAYRYQPTGTTASSGNAWPRQFALTAAYTLFNGFITGNQTRTAESQVRGQRETLRNTEQTVLLNGVTAYMNVIQAIALLD
LQRQSLAAFEQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQAVANLSSARAVYRQVIGVEPGKLFTPRSIEGMLP
PKVDRVISGGLSQHPAIKASEFAVDAAVFQVKVAEGALMPNLSLQGQLQQSYDSSIGVERVGTAAATLNLSVPIYQGGVE
YANIRQAKELLSQARIDVDVNRDAIRAQAVQFWGALEAAKVQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRD
LTNSQSALVVAQRDRVVAAYSLVSIIGRLDAVSLGLKVDVYNPQVHYNQVRDSWAGVRTPDGK

Sequences:

>Translated_463_residues
MSVARLVRRNGYAILAGASIIVLGMGSASAQSLDAALAMAYVNNPTLNSARAGTRAVDEKVPQALSGYRPTLGASASAGP
EAYRYQPTGTTASSGNAWPRQFALTAAYTLFNGFITGNQTRTAESQVRGQRETLRNTEQTVLLNGVTAYMNVIQAIALLD
LQRQSLAAFEQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQAVANLSSARAVYRQVIGVEPGKLFTPRSIEGMLP
PKVDRVISGGLSQHPAIKASEFAVDAAVFQVKVAEGALMPNLSLQGQLQQSYDSSIGVERVGTAAATLNLSVPIYQGGVE
YANIRQAKELLSQARIDVDVNRDAIRAQAVQFWGALEAAKVQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRD
LTNSQSALVVAQRDRVVAAYSLVSIIGRLDAVSLGLKVDVYNPQVHYNQVRDSWAGVRTPDGK
>Mature_462_residues
SVARLVRRNGYAILAGASIIVLGMGSASAQSLDAALAMAYVNNPTLNSARAGTRAVDEKVPQALSGYRPTLGASASAGPE
AYRYQPTGTTASSGNAWPRQFALTAAYTLFNGFITGNQTRTAESQVRGQRETLRNTEQTVLLNGVTAYMNVIQAIALLDL
QRQSLAAFEQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQAVANLSSARAVYRQVIGVEPGKLFTPRSIEGMLPP
KVDRVISGGLSQHPAIKASEFAVDAAVFQVKVAEGALMPNLSLQGQLQQSYDSSIGVERVGTAAATLNLSVPIYQGGVEY
ANIRQAKELLSQARIDVDVNRDAIRAQAVQFWGALEAAKVQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDL
TNSQSALVVAQRDRVVAAYSLVSIIGRLDAVSLGLKVDVYNPQVHYNQVRDSWAGVRTPDGK

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=433, Percent_Identity=26.0969976905312, Blast_Score=96, Evalue=6e-21,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49590; Mature: 49459

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVARLVRRNGYAILAGASIIVLGMGSASAQSLDAALAMAYVNNPTLNSARAGTRAVDEK
CCHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VPQALSGYRPTLGASASAGPEAYRYQPTGTTASSGNAWPRQFALTAAYTLFNGFITGNQT
HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCC
RTAESQVRGQRETLRNTEQTVLLNGVTAYMNVIQAIALLDLQRQSLAAFEQELRATRDRF
CCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVGEVTRTDVAQAEARVADAQYQVSQAVANLSSARAVYRQVIGVEPGKLFTPRSIEGMLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC
PKVDRVISGGLSQHPAIKASEFAVDAAVFQVKVAEGALMPNLSLQGQLQQSYDSSIGVER
HHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHH
VGTAAATLNLSVPIYQGGVEYANIRQAKELLSQARIDVDVNRDAIRAQAVQFWGALEAAK
HCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHH
VQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTNSQSALVVAQRDRVVAAY
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHH
SLVSIIGRLDAVSLGLKVDVYNPQVHYNQVRDSWAGVRTPDGK
HHHHHHHHHHHEEECEEEEEECCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVARLVRRNGYAILAGASIIVLGMGSASAQSLDAALAMAYVNNPTLNSARAGTRAVDEK
CHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VPQALSGYRPTLGASASAGPEAYRYQPTGTTASSGNAWPRQFALTAAYTLFNGFITGNQT
HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCC
RTAESQVRGQRETLRNTEQTVLLNGVTAYMNVIQAIALLDLQRQSLAAFEQELRATRDRF
CCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NVGEVTRTDVAQAEARVADAQYQVSQAVANLSSARAVYRQVIGVEPGKLFTPRSIEGMLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC
PKVDRVISGGLSQHPAIKASEFAVDAAVFQVKVAEGALMPNLSLQGQLQQSYDSSIGVER
HHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHCCCCCHHH
VGTAAATLNLSVPIYQGGVEYANIRQAKELLSQARIDVDVNRDAIRAQAVQFWGALEAAK
HCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHH
VQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTNSQSALVVAQRDRVVAAY
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHH
SLVSIIGRLDAVSLGLKVDVYNPQVHYNQVRDSWAGVRTPDGK
HHHHHHHHHHHEEECEEEEEECCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]