Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154248040

Identifier: 154248040

GI number: 154248040

Start: 4555558

End: 4557297

Strand: Direct

Name: 154248040

Synonym: Xaut_4119

Alternate gene names: NA

Gene position: 4555558-4557297 (Clockwise)

Preceding gene: 154248037

Following gene: 154248045

Centisome position: 85.81

GC content: 71.67

Gene sequence:

>1740_bases
ATGCCGCTTCTTATGACCGACGGACTGTGTGCAGTGCAACCAGAATGCCCGCGCCGCAGCGTCACGCCCCGCCCGATACC
AGCGCCGGGGCGCCGCGCGAAATGTCACGAGAGTGCCGCAAATAAACGGTTTCTCAAGCGGAAGGCATCAGCATGGGCCG
GTGCCTGGCGGATAGTCTTCATGATCGATACGGCCTCGTCCCGCGCGGCGGCGCAGGATGTTACCGACCGGGAGCGGTCG
GACGCGGCGCTGAAGCGCACCTATGATTGCGATATCTGCGTCGTCGGGGACGACGTGGCGGGGCTGGCCATTGCCATCGA
TCTGGCCCGGCGGGGGCGGGAGGTCATCCTGCTCACCTTCACCGGGGCGCGGCCGCTCCCCCTCGACGGTATTTTGAGCC
CCGGCTTCGCCATGCCCACCGCCGCGCTGGTGGAACGCGTGGGGCAGCACGATGCGCAGGAACTGCTCATCCTTTCCACC
CAGGCGAGCGAGCGGGCGCTGGCCTTCGCCCATAAGGCCGGTGTCGCGGTGGGGCCGCGCGGCCGGCTGTCGGTGGCCCG
CCCCCATGCGGCTGAGGCGTTGTTTCGTGAACATGAGCTGAGGCAGGAACTGGCGCCCGACACCACGGTGCTGGTGGGCG
CGCAGGATCTCGCCGCGCTGCTCGGCACCTCCACCTTCACCGCCGGCCTCGGCGTGGTTCCGGCGGAGCGTGTTTCTCCC
GCCACCCTGAAGGTGGCGCTGGAGGCCGAGGTGCTGGCGGCGGGCGTGCGCGTGATCCCGGTGGACGGAGCGCTCGCGGC
AGACCTCAAGGGCTTGCGGAAATATCTGACGGCCGCGCGGTGGCGGGTCCGCGCCTTCCAGGTGGTTATCACCGGGCCGG
AGGCCTTCGCCCGGCTCGGTCCGAAGGTGGCGGTGCTGCCGCGCGCGCCATGGGTCTACGGAGGCTTCCGCCTGCCCGCG
GTCGAGGTGCCCTATGCGGGCATGGTCGAGGAAACCGGGCTCACCGGCCTGCGCTATCATTTCGATGCCGGCCGGCTGAC
CCTTGCGGCCGCCACCGCCACGCGGGTGATGACGCGGGTGGGCGCGGCCCGGGTGCTGCGCCGCCATGCCGCCGAACTCT
ACCCGGTGGGGCCGAGCCTTTCGGACGAGGCTTCCGGCCGGATGCTGCCGGAGCCAGCCGGCATGCCGCTGGTGCATGAG
GGGGAACGGGGCGTCTGGTATGCACTTGCCGCCGCCGGCGATGCCCTGAGCCATGGCTTCCTTGCCGGCCGCCTCATCTC
CGGCGCCATCGCCGAAAAGGACGACCGCATCGCCTTGCTTCAGCCGTTCGCCTCAACGCCGTTGTCCGGCTGGGCCGGCC
GGGTGGCGCGCTTCGCCGGCTATTGGCATGTGCGGCTGGCGGCTCGGCTGCATATGGACAAGATGGCATCCTCCCTCGCG
CCCGATCCGGCAGATGTGGTTCCGGCACCGGACCTGCTCCCGGACGAGCATGTGGACGACGCGCGGGCGCTTCCGCCCAT
GCCGGCGCCCGCCGTTCTAGCGGCCCCCACCGCGCTGCCCCGAAGGGGGATGGCAGCTGCAACCTCGGCCTCGCGCCATG
CGGCGAGGGCGGCGCTCCATGCGGCTTCCGGCTGGGCTTCAGGGCTTGCCGCCCGTGCGGCGGCGGAACCCGCCCGCCGC
CGTCGCGCCCGACCGGAGCCGGACGAGGAGGTCCCGCCCCAGCGGCCGCGGGGCGCCTAG

Upstream 100 bases:

>100_bases
GCCAGCGGGCGCTCAGGGTCGACAATGCCGTCCGGCCAGTCGGACTTGGCGTGGCGCAGCAAAATCAGACGGCGCATGAG
CTTTTGAACCAATCAATGAA

Downstream 100 bases:

>100_bases
AGCCCTATCCCCGGATGTAATAGGCCTGCGGCCGCCGGCCCTCGCGGAAATAGCCGAAGAAGGTGGCCGCGCCGACTGCC
TGCGCCAGCAGCCCCGGCAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Glycine/D-Amino Acid Oxidase

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERS
DAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILST
QASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP
ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPA
VEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHE
GERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA
PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARR
RRARPEPDEEVPPQRPRGA

Sequences:

>Translated_579_residues
MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERS
DAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILST
QASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP
ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPA
VEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHE
GERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA
PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARR
RRARPEPDEEVPPQRPRGA
>Mature_578_residues
PLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERSD
AALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQ
ASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSPA
TLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPAV
EVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEG
ERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLAP
DPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARRR
RARPEPDEEVPPQRPRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61301; Mature: 61170

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVF
CCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
MIDTASSRAAAQDVTDRERSDAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTF
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEEEHHHCCCEEEEEEE
TGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQASERALAFAHKAGVAVGPR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCC
GRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP
CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHCCCCCCCCCCCCC
ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLG
CEEEEEEEHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHCC
PKVAVLPRAPWVYGGFRLPAVEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRV
CCEEEECCCCEEECCEECCEEECCCCCCHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHH
GAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEGERGVWYALAAAGDALSHGF
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHH
LAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC
PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
AASGWASGLAARAAAEPARRRRARPEPDEEVPPQRPRGA
HHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVF
CEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
MIDTASSRAAAQDVTDRERSDAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTF
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEEEHHHCCCEEEEEEE
TGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQASERALAFAHKAGVAVGPR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCC
GRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP
CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHCCCCCCCCCCCCC
ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLG
CEEEEEEEHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHCC
PKVAVLPRAPWVYGGFRLPAVEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRV
CCEEEECCCCEEECCEECCEEECCCCCCHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHH
GAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEGERGVWYALAAAGDALSHGF
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHH
LAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA
HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC
PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
AASGWASGLAARAAAEPARRRRARPEPDEEVPPQRPRGA
HHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA