Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248040
Identifier: 154248040
GI number: 154248040
Start: 4555558
End: 4557297
Strand: Direct
Name: 154248040
Synonym: Xaut_4119
Alternate gene names: NA
Gene position: 4555558-4557297 (Clockwise)
Preceding gene: 154248037
Following gene: 154248045
Centisome position: 85.81
GC content: 71.67
Gene sequence:
>1740_bases ATGCCGCTTCTTATGACCGACGGACTGTGTGCAGTGCAACCAGAATGCCCGCGCCGCAGCGTCACGCCCCGCCCGATACC AGCGCCGGGGCGCCGCGCGAAATGTCACGAGAGTGCCGCAAATAAACGGTTTCTCAAGCGGAAGGCATCAGCATGGGCCG GTGCCTGGCGGATAGTCTTCATGATCGATACGGCCTCGTCCCGCGCGGCGGCGCAGGATGTTACCGACCGGGAGCGGTCG GACGCGGCGCTGAAGCGCACCTATGATTGCGATATCTGCGTCGTCGGGGACGACGTGGCGGGGCTGGCCATTGCCATCGA TCTGGCCCGGCGGGGGCGGGAGGTCATCCTGCTCACCTTCACCGGGGCGCGGCCGCTCCCCCTCGACGGTATTTTGAGCC CCGGCTTCGCCATGCCCACCGCCGCGCTGGTGGAACGCGTGGGGCAGCACGATGCGCAGGAACTGCTCATCCTTTCCACC CAGGCGAGCGAGCGGGCGCTGGCCTTCGCCCATAAGGCCGGTGTCGCGGTGGGGCCGCGCGGCCGGCTGTCGGTGGCCCG CCCCCATGCGGCTGAGGCGTTGTTTCGTGAACATGAGCTGAGGCAGGAACTGGCGCCCGACACCACGGTGCTGGTGGGCG CGCAGGATCTCGCCGCGCTGCTCGGCACCTCCACCTTCACCGCCGGCCTCGGCGTGGTTCCGGCGGAGCGTGTTTCTCCC GCCACCCTGAAGGTGGCGCTGGAGGCCGAGGTGCTGGCGGCGGGCGTGCGCGTGATCCCGGTGGACGGAGCGCTCGCGGC AGACCTCAAGGGCTTGCGGAAATATCTGACGGCCGCGCGGTGGCGGGTCCGCGCCTTCCAGGTGGTTATCACCGGGCCGG AGGCCTTCGCCCGGCTCGGTCCGAAGGTGGCGGTGCTGCCGCGCGCGCCATGGGTCTACGGAGGCTTCCGCCTGCCCGCG GTCGAGGTGCCCTATGCGGGCATGGTCGAGGAAACCGGGCTCACCGGCCTGCGCTATCATTTCGATGCCGGCCGGCTGAC CCTTGCGGCCGCCACCGCCACGCGGGTGATGACGCGGGTGGGCGCGGCCCGGGTGCTGCGCCGCCATGCCGCCGAACTCT ACCCGGTGGGGCCGAGCCTTTCGGACGAGGCTTCCGGCCGGATGCTGCCGGAGCCAGCCGGCATGCCGCTGGTGCATGAG GGGGAACGGGGCGTCTGGTATGCACTTGCCGCCGCCGGCGATGCCCTGAGCCATGGCTTCCTTGCCGGCCGCCTCATCTC CGGCGCCATCGCCGAAAAGGACGACCGCATCGCCTTGCTTCAGCCGTTCGCCTCAACGCCGTTGTCCGGCTGGGCCGGCC GGGTGGCGCGCTTCGCCGGCTATTGGCATGTGCGGCTGGCGGCTCGGCTGCATATGGACAAGATGGCATCCTCCCTCGCG CCCGATCCGGCAGATGTGGTTCCGGCACCGGACCTGCTCCCGGACGAGCATGTGGACGACGCGCGGGCGCTTCCGCCCAT GCCGGCGCCCGCCGTTCTAGCGGCCCCCACCGCGCTGCCCCGAAGGGGGATGGCAGCTGCAACCTCGGCCTCGCGCCATG CGGCGAGGGCGGCGCTCCATGCGGCTTCCGGCTGGGCTTCAGGGCTTGCCGCCCGTGCGGCGGCGGAACCCGCCCGCCGC CGTCGCGCCCGACCGGAGCCGGACGAGGAGGTCCCGCCCCAGCGGCCGCGGGGCGCCTAG
Upstream 100 bases:
>100_bases GCCAGCGGGCGCTCAGGGTCGACAATGCCGTCCGGCCAGTCGGACTTGGCGTGGCGCAGCAAAATCAGACGGCGCATGAG CTTTTGAACCAATCAATGAA
Downstream 100 bases:
>100_bases AGCCCTATCCCCGGATGTAATAGGCCTGCGGCCGCCGGCCCTCGCGGAAATAGCCGAAGAAGGTGGCCGCGCCGACTGCC TGCGCCAGCAGCCCCGGCAT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Glycine/D-Amino Acid Oxidase
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERS DAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILST QASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPA VEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHE GERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARR RRARPEPDEEVPPQRPRGA
Sequences:
>Translated_579_residues MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERS DAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILST QASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPA VEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHE GERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARR RRARPEPDEEVPPQRPRGA >Mature_578_residues PLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVFMIDTASSRAAAQDVTDRERSD AALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTFTGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQ ASERALAFAHKAGVAVGPRGRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSPA TLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLGPKVAVLPRAPWVYGGFRLPAV EVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRVGAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEG ERGVWYALAAAGDALSHGFLAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLAP DPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALHAASGWASGLAARAAAEPARRR RARPEPDEEVPPQRPRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61301; Mature: 61170
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVF CCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE MIDTASSRAAAQDVTDRERSDAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTF EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEEEHHHCCCEEEEEEE TGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQASERALAFAHKAGVAVGPR CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCC GRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHCCCCCCCCCCCCC ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLG CEEEEEEEHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHCC PKVAVLPRAPWVYGGFRLPAVEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRV CCEEEECCCCEEECCEECCEEECCCCCCHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHH GAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEGERGVWYALAAAGDALSHGF HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHH LAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AASGWASGLAARAAAEPARRRRARPEPDEEVPPQRPRGA HHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLLMTDGLCAVQPECPRRSVTPRPIPAPGRRAKCHESAANKRFLKRKASAWAGAWRIVF CEEEECCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE MIDTASSRAAAQDVTDRERSDAALKRTYDCDICVVGDDVAGLAIAIDLARRGREVILLTF EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEEEHHHCCCEEEEEEE TGARPLPLDGILSPGFAMPTAALVERVGQHDAQELLILSTQASERALAFAHKAGVAVGPR CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCEECCC GRLSVARPHAAEALFREHELRQELAPDTTVLVGAQDLAALLGTSTFTAGLGVVPAERVSP CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCHHHHCCCCCCCCCCCCC ATLKVALEAEVLAAGVRVIPVDGALAADLKGLRKYLTAARWRVRAFQVVITGPEAFARLG CEEEEEEEHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHHCC PKVAVLPRAPWVYGGFRLPAVEVPYAGMVEETGLTGLRYHFDAGRLTLAAATATRVMTRV CCEEEECCCCEEECCEECCEEECCCCCCHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHH GAARVLRRHAAELYPVGPSLSDEASGRMLPEPAGMPLVHEGERGVWYALAAAGDALSHGF HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHH LAGRLISGAIAEKDDRIALLQPFASTPLSGWAGRVARFAGYWHVRLAARLHMDKMASSLA HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCC PDPADVVPAPDLLPDEHVDDARALPPMPAPAVLAAPTALPRRGMAAATSASRHAARAALH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AASGWASGLAARAAAEPARRRRARPEPDEEVPPQRPRGA HHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA