Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248037
Identifier: 154248037
GI number: 154248037
Start: 4552840
End: 4553481
Strand: Direct
Name: 154248037
Synonym: Xaut_4116
Alternate gene names: NA
Gene position: 4552840-4553481 (Clockwise)
Preceding gene: 154248036
Following gene: 154248040
Centisome position: 85.76
GC content: 70.25
Gene sequence:
>642_bases ATGACTTTCGTTCGCAGGAGCCGTTTCGCTCGCCGTCTCGCGTCCATCGCCCATGCCGTGCCCCGGCTCGCCGCCCTCCT GTCCGGCGCGGTCCTCACCCTCGCTCTGGCGGGATGCGGCTCCACGCCGACCCCCACCTACAACCTCTCCGCCCCCAGCG GCTTCACGGCAGGGGGCAGCGGCAACGGACAGATGGTGGTGGTGGCGCCCACGGCGCTTGCCGTGCTCAACACCGACAAG GTGATGGTGGAACCGGGGCCGGGCCAGGTGGCCTATCTGTCCGACGCCCAGTGGAGCGACACCCTCCCGGCGCTGCTTCA GGCGCGCACCATCCAGGCCTTCGAGAATGCCAGCAAGCTGCGCCGCGTCGCCCGTCCTGGCGACGGGGTGAATGCGGACT ACCAGCTGGTCATCGACATCCGCACCTTCGCCCTGCGCATCACCGACCAGGGGCCGGTGGCGGTGGTGGAACTATCGGCC AAGCTCATCGGCACCCAGAGCGGTCGCATCCTCGCGGCGCAGGTGTTCAAGGCGGCGGTGCCGGCCGCCTCCACCGCCGG CCCGGTGGCAACCGCGGCGCTGGATTCGGCGCAGGAACAGGTGCTGGTGCAGATGGTGCGCTGGGCCTCGGCCAAGTTCT GA
Upstream 100 bases:
>100_bases AGCGAAATCGACCGCGTGCTCCGCAACATCGAGCGCAACCCGCAGCAGTTCATCTTCGGCGGCGGCAATTCCATTCCGAA ATACGGGCGATGAGCCGACC
Downstream 100 bases:
>100_bases GGCCAAGTTCTGACGACTGCAATCCTGATGGCCTGAGGCCGCGCCTCGCGTAGGCGCCGGGCAGGCCTCGGCCTTTACGC CAGCCGGTCGCCCAACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTFVRRSRFARRLASIAHAVPRLAALLSGAVLTLALAGCGSTPTPTYNLSAPSGFTAGGSGNGQMVVVAPTALAVLNTDK VMVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKLRRVARPGDGVNADYQLVIDIRTFALRITDQGPVAVVELSA KLIGTQSGRILAAQVFKAAVPAASTAGPVATAALDSAQEQVLVQMVRWASAKF
Sequences:
>Translated_213_residues MTFVRRSRFARRLASIAHAVPRLAALLSGAVLTLALAGCGSTPTPTYNLSAPSGFTAGGSGNGQMVVVAPTALAVLNTDK VMVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKLRRVARPGDGVNADYQLVIDIRTFALRITDQGPVAVVELSA KLIGTQSGRILAAQVFKAAVPAASTAGPVATAALDSAQEQVLVQMVRWASAKF >Mature_212_residues TFVRRSRFARRLASIAHAVPRLAALLSGAVLTLALAGCGSTPTPTYNLSAPSGFTAGGSGNGQMVVVAPTALAVLNTDKV MVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKLRRVARPGDGVNADYQLVIDIRTFALRITDQGPVAVVELSAK LIGTQSGRILAAQVFKAAVPAASTAGPVATAALDSAQEQVLVQMVRWASAKF
Specific function: Unknown
COG id: COG3218
COG function: function code R; ABC-type uncharacterized transport system, auxiliary component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 22113; Mature: 21982
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVRRSRFARRLASIAHAVPRLAALLSGAVLTLALAGCGSTPTPTYNLSAPSGFTAGGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC GNGQMVVVAPTALAVLNTDKVMVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKL CCCEEEEEECCEEEEEECCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RRVARPGDGVNADYQLVIDIRTFALRITDQGPVAVVELSAKLIGTQSGRILAAQVFKAAV HHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHC PAASTAGPVATAALDSAQEQVLVQMVRWASAKF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFVRRSRFARRLASIAHAVPRLAALLSGAVLTLALAGCGSTPTPTYNLSAPSGFTAGGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC GNGQMVVVAPTALAVLNTDKVMVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKL CCCEEEEEECCEEEEEECCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RRVARPGDGVNADYQLVIDIRTFALRITDQGPVAVVELSAKLIGTQSGRILAAQVFKAAV HHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHC PAASTAGPVATAALDSAQEQVLVQMVRWASAKF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]