Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is folD [H]
Identifier: 154248007
GI number: 154248007
Start: 4525952
End: 4526839
Strand: Direct
Name: folD [H]
Synonym: Xaut_4086
Alternate gene names: 154248007
Gene position: 4525952-4526839 (Clockwise)
Preceding gene: 154248006
Following gene: 154248015
Centisome position: 85.25
GC content: 69.37
Gene sequence:
>888_bases ATGGGGGATGTGGTGATCGAGACCAGGCCCATCGACGGAAAGGCGTTCGCAGCCGGGCTCCGGGCCCGCATTGCCGAGGA GGTGGCCCGCCTCGGCGCCGCCCACGGGCTCAAGCCGGGCCTTGCCGTGGTCCTCGTGGGCGAGGACCCGGCCAGCCAGG TTTACGTGCGCAACAAGGCGGCCCAGACCCTAGAGGCCGGCATGACCTCCTTCGAGCACAAGCTCGCGGTGGACACGCCC GAGACCGAGCTGCTGGCGCTGATCGCCCGACTCAACGCCGATCCGGCAGTGAACGGCATTCTGGTTCAGCTGCCGCTGCC GGCGCAGATCGATGCCATGAAGGTGCTCTCCACCATCGATCCGGCCAAGGACGTGGACGGCTTCCATGTGGTGAATGCCG GCCGCCTCGCTGTGGGCCTCGACGCGCTGGTGCCGTGCACGCCGCTCGGCTGCGTGATGCTGCTGAAGCACCACCTGGGC AACCTTTCCGGCCTCAAGGCAGTGGTGGTGGGGCGCTCCAACATTGTCGGCAAGCCGGCGGCGCAGCTGCTGCTGAAAGA GGACTGCACCGTCACCATCGCCCATTCGCGCACCCGCGACCTGCCCGGCGAGTGCCGCACCGCCGACATCCTGGTCGCCG CCGTGGGCCGGCCGGAGATGGTGCGCGGCGACTGGATCAAGCCCGGCGCCACCGTGATCGACGTGGGCATCAACCGCATT CCCAAGCCCGACGGCAAGACGCGCCTCGTGGGCGACGTAGCCTATCAGGAGGCGCAGGGCATCGCCGGCCTGATCACCCC GGTTCCGGGCGGCGTCGGCCCCATGACCATCGCCTGCCTGCTCCAGAACACCCTCACCGCCGCCAAGCGGCAGGCGGGTC TGGAATAG
Upstream 100 bases:
>100_bases GAGCATCAGGCCCGCGCGCGGCACCGCCCTTCCCTGGATGAGGCGCGCCGTGGCCGGCGGGCAGACGGCCCGTCCACCCT TGCCGACGGGACCGAGGCAT
Downstream 100 bases:
>100_bases CGCCGGGCCGCTCAGCCCGGCGCAGCCGGCTGGGGGCCTGGAATAACAAAGGGCCGGTGAGCTTGGCGCACCGGCCCTTT GACTTATCTGGAATCCGACT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGDVVIETRPIDGKAFAAGLRARIAEEVARLGAAHGLKPGLAVVLVGEDPASQVYVRNKAAQTLEAGMTSFEHKLAVDTP ETELLALIARLNADPAVNGILVQLPLPAQIDAMKVLSTIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLG NLSGLKAVVVGRSNIVGKPAAQLLLKEDCTVTIAHSRTRDLPGECRTADILVAAVGRPEMVRGDWIKPGATVIDVGINRI PKPDGKTRLVGDVAYQEAQGIAGLITPVPGGVGPMTIACLLQNTLTAAKRQAGLE
Sequences:
>Translated_295_residues MGDVVIETRPIDGKAFAAGLRARIAEEVARLGAAHGLKPGLAVVLVGEDPASQVYVRNKAAQTLEAGMTSFEHKLAVDTP ETELLALIARLNADPAVNGILVQLPLPAQIDAMKVLSTIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLG NLSGLKAVVVGRSNIVGKPAAQLLLKEDCTVTIAHSRTRDLPGECRTADILVAAVGRPEMVRGDWIKPGATVIDVGINRI PKPDGKTRLVGDVAYQEAQGIAGLITPVPGGVGPMTIACLLQNTLTAAKRQAGLE >Mature_294_residues GDVVIETRPIDGKAFAAGLRARIAEEVARLGAAHGLKPGLAVVLVGEDPASQVYVRNKAAQTLEAGMTSFEHKLAVDTPE TELLALIARLNADPAVNGILVQLPLPAQIDAMKVLSTIDPAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGN LSGLKAVVVGRSNIVGKPAAQLLLKEDCTVTIAHSRTRDLPGECRTADILVAAVGRPEMVRGDWIKPGATVIDVGINRIP KPDGKTRLVGDVAYQEAQGIAGLITPVPGGVGPMTIACLLQNTLTAAKRQAGLE
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=47.9166666666667, Blast_Score=245, Evalue=3e-65, Organism=Homo sapiens, GI222418558, Length=291, Percent_Identity=43.298969072165, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI94721354, Length=296, Percent_Identity=43.2432432432432, Blast_Score=204, Evalue=6e-53, Organism=Homo sapiens, GI36796743, Length=201, Percent_Identity=31.8407960199005, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=53.405017921147, Blast_Score=260, Evalue=7e-71, Organism=Caenorhabditis elegans, GI17568735, Length=289, Percent_Identity=42.9065743944637, Blast_Score=215, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6319558, Length=286, Percent_Identity=44.0559440559441, Blast_Score=238, Evalue=7e-64, Organism=Saccharomyces cerevisiae, GI6321643, Length=294, Percent_Identity=45.578231292517, Blast_Score=237, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6322933, Length=322, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=50, Blast_Score=257, Evalue=8e-69, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=50, Blast_Score=256, Evalue=9e-69, Organism=Drosophila melanogaster, GI62472483, Length=288, Percent_Identity=47.5694444444444, Blast_Score=240, Evalue=7e-64, Organism=Drosophila melanogaster, GI45551871, Length=288, Percent_Identity=47.5694444444444, Blast_Score=240, Evalue=7e-64, Organism=Drosophila melanogaster, GI24645718, Length=288, Percent_Identity=47.5694444444444, Blast_Score=240, Evalue=8e-64, Organism=Drosophila melanogaster, GI17137370, Length=288, Percent_Identity=47.5694444444444, Blast_Score=240, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30719; Mature: 30588
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVVIETRPIDGKAFAAGLRARIAEEVARLGAAHGLKPGLAVVLVGEDPASQVYVRNKA CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHH AQTLEAGMTSFEHKLAVDTPETELLALIARLNADPAVNGILVQLPLPAQIDAMKVLSTID HHHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCC PAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSGLKAVVVGRSNIVGKPA CCCCCCCEEEEECCCEEECHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH AQLLLKEDCTVTIAHSRTRDLPGECRTADILVAAVGRPEMVRGDWIKPGATVIDVGINRI HHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCCC PKPDGKTRLVGDVAYQEAQGIAGLITPVPGGVGPMTIACLLQNTLTAAKRQAGLE CCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GDVVIETRPIDGKAFAAGLRARIAEEVARLGAAHGLKPGLAVVLVGEDPASQVYVRNKA CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHH AQTLEAGMTSFEHKLAVDTPETELLALIARLNADPAVNGILVQLPLPAQIDAMKVLSTID HHHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCC PAKDVDGFHVVNAGRLAVGLDALVPCTPLGCVMLLKHHLGNLSGLKAVVVGRSNIVGKPA CCCCCCCEEEEECCCEEECHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH AQLLLKEDCTVTIAHSRTRDLPGECRTADILVAAVGRPEMVRGDWIKPGATVIDVGINRI HHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCCC PKPDGKTRLVGDVAYQEAQGIAGLITPVPGGVGPMTIACLLQNTLTAAKRQAGLE CCCCCCEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA