Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247985
Identifier: 154247985
GI number: 154247985
Start: 4498332
End: 4499027
Strand: Direct
Name: 154247985
Synonym: Xaut_4064
Alternate gene names: NA
Gene position: 4498332-4499027 (Clockwise)
Preceding gene: 154247984
Following gene: 154247986
Centisome position: 84.73
GC content: 63.65
Gene sequence:
>696_bases ATGTCCAGAATTGTCGACCTCAGCCTGCTCATCGAAGACAACATGCCCGCCCACAAGCTGTTCCAGCGGCCGGTGATCAC CACCCACCTCAGCCACGAAAGCTCCAAGGCGTTCGGCCTCGGCGTGCCCGGCGACGCCATGACCTTCCAGACCAATTTCA TTGCCATGCTGGACCATGTGGGCACCCATGTGGACGCCTACCGCCATGTGAAGCCCGACGGCGCCTCCATCGACGAGATG CCCCTCGACATGTTCATGGGCAAGGCGGTGTGCTTCGACCTGCGCCACATCCCCGACCTCGGCGACATCACCGATGAGGA CCTGGAGAAGGCCGAGGCGGCCGCCGGCGTGAAGGTGGACGGCCACATCGTGCTGCTGTGCACCGGCTTCCACGCCCGCA ATTATCCGAGCCTCGACAGCGTTTGGAAGAACCCGCTGCTGACGGTGGAAGCCACCAAGTGGCTCTACGCGCGCGGCTCG ATGATGCAGGGGGTGGAAGGCCCCTCCACCGACAAGCCCACCGACAACATCTTCGCCCAGCACCGCCTGTGCCGCGAGCT CGGGATGAGCCACTGGGAGTGGCTGGTGAATCTGGAAGAACTGGTGGGCAAGGGCGAATTCCAGTTCTTCGGCGTGCCGC TGAAGTTCAAGGGCGGCTCCGGATCGCCAGTCCGTGCCTTCGCCGTCCTCAATTGA
Upstream 100 bases:
>100_bases CTCGCCCGCGATCCCGAGGTGATGGAGGCCTTCCTCGGCCGCAAGAAACCGGCGGCCTGAGCTCATCTTTTTGCAAGTCG ATCCAGTCCAAGGAGCCCCC
Downstream 100 bases:
>100_bases TTTCACCAATACGTCTCATCTGCCCTGATCGAGACGTATGGGTCTGCTGGATGGTCACTGTCGGCCATCCAGCAGCACTC TTCTTATGGTTCAACGCCAA
Product: cyclase family protein
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Superfamily; Cyclase-Related Protein; Kynurenine Formamidase; Arylformamidase
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSRIVDLSLLIEDNMPAHKLFQRPVITTHLSHESSKAFGLGVPGDAMTFQTNFIAMLDHVGTHVDAYRHVKPDGASIDEM PLDMFMGKAVCFDLRHIPDLGDITDEDLEKAEAAAGVKVDGHIVLLCTGFHARNYPSLDSVWKNPLLTVEATKWLYARGS MMQGVEGPSTDKPTDNIFAQHRLCRELGMSHWEWLVNLEELVGKGEFQFFGVPLKFKGGSGSPVRAFAVLN
Sequences:
>Translated_231_residues MSRIVDLSLLIEDNMPAHKLFQRPVITTHLSHESSKAFGLGVPGDAMTFQTNFIAMLDHVGTHVDAYRHVKPDGASIDEM PLDMFMGKAVCFDLRHIPDLGDITDEDLEKAEAAAGVKVDGHIVLLCTGFHARNYPSLDSVWKNPLLTVEATKWLYARGS MMQGVEGPSTDKPTDNIFAQHRLCRELGMSHWEWLVNLEELVGKGEFQFFGVPLKFKGGSGSPVRAFAVLN >Mature_230_residues SRIVDLSLLIEDNMPAHKLFQRPVITTHLSHESSKAFGLGVPGDAMTFQTNFIAMLDHVGTHVDAYRHVKPDGASIDEMP LDMFMGKAVCFDLRHIPDLGDITDEDLEKAEAAAGVKVDGHIVLLCTGFHARNYPSLDSVWKNPLLTVEATKWLYARGSM MQGVEGPSTDKPTDNIFAQHRLCRELGMSHWEWLVNLEELVGKGEFQFFGVPLKFKGGSGSPVRAFAVLN
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25592; Mature: 25460
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIVDLSLLIEDNMPAHKLFQRPVITTHLSHESSKAFGLGVPGDAMTFQTNFIAMLDHV CCCEEEEEEEEECCCCHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEHHHHHHHHHHH GTHVDAYRHVKPDGASIDEMPLDMFMGKAVCFDLRHIPDLGDITDEDLEKAEAAAGVKVD CCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEC GHIVLLCTGFHARNYPSLDSVWKNPLLTVEATKWLYARGSMMQGVEGPSTDKPTDNIFAQ CEEEEEEECCCCCCCCCHHHHHCCCCEEEEECCEEEECCCHHCCCCCCCCCCCCHHHHHH HRLCRELGMSHWEWLVNLEELVGKGEFQFFGVPLKFKGGSGSPVRAFAVLN HHHHHHHCCHHHHHHEEHHHHHCCCCEEEEECEEEEECCCCCCEEEEEEEC >Mature Secondary Structure SRIVDLSLLIEDNMPAHKLFQRPVITTHLSHESSKAFGLGVPGDAMTFQTNFIAMLDHV CCEEEEEEEEECCCCHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEHHHHHHHHHHH GTHVDAYRHVKPDGASIDEMPLDMFMGKAVCFDLRHIPDLGDITDEDLEKAEAAAGVKVD CCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEC GHIVLLCTGFHARNYPSLDSVWKNPLLTVEATKWLYARGSMMQGVEGPSTDKPTDNIFAQ CEEEEEEECCCCCCCCCHHHHHCCCCEEEEECCEEEECCCHHCCCCCCCCCCCCHHHHHH HRLCRELGMSHWEWLVNLEELVGKGEFQFFGVPLKFKGGSGSPVRAFAVLN HHHHHHHCCHHHHHHEEHHHHHCCCCEEEEECEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA