Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is pstS [H]
Identifier: 154247880
GI number: 154247880
Start: 4380023
End: 4381051
Strand: Direct
Name: pstS [H]
Synonym: Xaut_3957
Alternate gene names: 154247880
Gene position: 4380023-4381051 (Clockwise)
Preceding gene: 154247875
Following gene: 154247881
Centisome position: 82.5
GC content: 64.33
Gene sequence:
>1029_bases GTGAATCGCATTCTTGTCTGGACAGCTGCGGCGACGCTCGCGGCCCTGTCGATGTTCGCGCCTCCGGCGCGCGCCGCGGA GGTGCGGGGTGCCGGCTCCACCTTCGCCTATCCGATCATCTGGAAATGGGCGGAGGCGTTTCGTGAGCGCACAGGCCACA TCGTAGGATATCAGTCGGTGGGTTCGTCGGCCGGCGTCAACCGTATTAAGGACGGGGTGGTGGATTTCGGCGCGTCCGAC AAGCCGCTGAAGCCGGAAGAGCTGGAGAAATATGGCCTCGGCCAGTTCCCCATCGTGTTCGGTGGCGTCGTTCCGGTGTT CAACGTGGACGGCGTGGGGCCCGGCCAGCTCCGCTTCACCGGCGCCCTTCTCGCCGACATCTATCTCGGCAAGGTCACGA CCTGGTCCGATCCCGCCATCAGGGCCCTCAATCCCGACGTCAAGCTGCCCAACGCGAAGATCGTGGTGGTGCACCGTTCC GATGGATCTGGGACTACGTTCAACTGGGTGTCCTACCTTGCCAAGGCGAGCCCGGAGTGGAAGCAGCAGGTCGGCGAAGG CAGCGCAGTCGCCTGGCCGGTGGGGTATGGCGCGCGCGGTAACGAAGGGGTCTCGACCGAGGTCAAGCGGGTCCCGAATG CCATCGGCTATGTCGAATACACCTATGTGGTGCAGGTGAAGCTGGCCTATGGCCTCGTCCAGAACCGTGCTGGCAAGTTC ATCGCACCCAGCGCGGCGGCGTTCCAGGCGGCGGCGCTGAGCTTCGATTGGGCCGGCGCCAAGGACTTTTTCGTCGTCAT CACCGATTCCCCCGCCGAGGATGCCTATCCTATTGCGGCGACCACCTTCGCTCTCATGTATCGCGAGCCGAAGGTGCCGG CGAACAGCCAAGCCGCCTTCGAGTTCTGGCGCTTCGCCCTGGGCGAGGGCGAGAAATTTGCGTCCGAGCTCGGCTATGTT CCCTTGCCGCCGGCTCTGGTCCAGCAGGTCAAGGACTATTGGGCCAGGACCTTCAAGGGCGGTGCCTGA
Upstream 100 bases:
>100_bases GAAGGCCATATAGCGATCTGTCCACTCCTATCGACATAATGACTCGTATGGAGCTATCTGTTTCCAGCGATATGTCGCTA GGACCCAAGGGAGGCCAGCC
Downstream 100 bases:
>100_bases GGCACTTGGGCTGACGCGTGAGCAGCATTCGAACGGTGAGACAAGATGGACGAGACGAAGCTGAATGGGGAAGACGCCAC GCGGATCTTCGATGCGCTGT
Product: phosphate ABC transporter periplasmic phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNRILVWTAAATLAALSMFAPPARAAEVRGAGSTFAYPIIWKWAEAFRERTGHIVGYQSVGSSAGVNRIKDGVVDFGASD KPLKPEELEKYGLGQFPIVFGGVVPVFNVDGVGPGQLRFTGALLADIYLGKVTTWSDPAIRALNPDVKLPNAKIVVVHRS DGSGTTFNWVSYLAKASPEWKQQVGEGSAVAWPVGYGARGNEGVSTEVKRVPNAIGYVEYTYVVQVKLAYGLVQNRAGKF IAPSAAAFQAAALSFDWAGAKDFFVVITDSPAEDAYPIAATTFALMYREPKVPANSQAAFEFWRFALGEGEKFASELGYV PLPPALVQQVKDYWARTFKGGA
Sequences:
>Translated_342_residues MNRILVWTAAATLAALSMFAPPARAAEVRGAGSTFAYPIIWKWAEAFRERTGHIVGYQSVGSSAGVNRIKDGVVDFGASD KPLKPEELEKYGLGQFPIVFGGVVPVFNVDGVGPGQLRFTGALLADIYLGKVTTWSDPAIRALNPDVKLPNAKIVVVHRS DGSGTTFNWVSYLAKASPEWKQQVGEGSAVAWPVGYGARGNEGVSTEVKRVPNAIGYVEYTYVVQVKLAYGLVQNRAGKF IAPSAAAFQAAALSFDWAGAKDFFVVITDSPAEDAYPIAATTFALMYREPKVPANSQAAFEFWRFALGEGEKFASELGYV PLPPALVQQVKDYWARTFKGGA >Mature_342_residues MNRILVWTAAATLAALSMFAPPARAAEVRGAGSTFAYPIIWKWAEAFRERTGHIVGYQSVGSSAGVNRIKDGVVDFGASD KPLKPEELEKYGLGQFPIVFGGVVPVFNVDGVGPGQLRFTGALLADIYLGKVTTWSDPAIRALNPDVKLPNAKIVVVHRS DGSGTTFNWVSYLAKASPEWKQQVGEGSAVAWPVGYGARGNEGVSTEVKRVPNAIGYVEYTYVVQVKLAYGLVQNRAGKF IAPSAAAFQAAALSFDWAGAKDFFVVITDSPAEDAYPIAATTFALMYREPKVPANSQAAFEFWRFALGEGEKFASELGYV PLPPALVQQVKDYWARTFKGGA
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=328, Percent_Identity=45.4268292682927, Blast_Score=287, Evalue=7e-79,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36798; Mature: 36798
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILVWTAAATLAALSMFAPPARAAEVRGAGSTFAYPIIWKWAEAFRERTGHIVGYQSV CCEEEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEHHC GSSAGVNRIKDGVVDFGASDKPLKPEELEKYGLGQFPIVFGGVVPVFNVDGVGPGQLRFT CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCEEEH GALLADIYLGKVTTWSDPAIRALNPDVKLPNAKIVVVHRSDGSGTTFNWVSYLAKASPEW HHHHHHHHHCCEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH KQQVGEGSAVAWPVGYGARGNEGVSTEVKRVPNAIGYVEYTYVVQVKLAYGLVQNRAGKF HHHCCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHCEEEEEEEEEEHHHHHHHHHCCCCE IAPSAAAFQAAALSFDWAGAKDFFVVITDSPAEDAYPIAATTFALMYREPKVPANSQAAF ECCCHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHEECCCCCCCCHHHH EFWRFALGEGEKFASELGYVPLPPALVQQVKDYWARTFKGGA HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRILVWTAAATLAALSMFAPPARAAEVRGAGSTFAYPIIWKWAEAFRERTGHIVGYQSV CCEEEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEHHC GSSAGVNRIKDGVVDFGASDKPLKPEELEKYGLGQFPIVFGGVVPVFNVDGVGPGQLRFT CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCEEEH GALLADIYLGKVTTWSDPAIRALNPDVKLPNAKIVVVHRSDGSGTTFNWVSYLAKASPEW HHHHHHHHHCCEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH KQQVGEGSAVAWPVGYGARGNEGVSTEVKRVPNAIGYVEYTYVVQVKLAYGLVQNRAGKF HHHCCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHCEEEEEEEEEEHHHHHHHHHCCCCE IAPSAAAFQAAALSFDWAGAKDFFVVITDSPAEDAYPIAATTFALMYREPKVPANSQAAF ECCCHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHEECCCCCCCCHHHH EFWRFALGEGEKFASELGYVPLPPALVQQVKDYWARTFKGGA HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]