Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is livG [H]
Identifier: 154247825
GI number: 154247825
Start: 4319920
End: 4320846
Strand: Direct
Name: livG [H]
Synonym: Xaut_3902
Alternate gene names: 154247825
Gene position: 4319920-4320846 (Clockwise)
Preceding gene: 154247824
Following gene: 154247826
Centisome position: 81.37
GC content: 69.15
Gene sequence:
>927_bases ATGGCGAACCTTGATCCCGTGGCCGGCGCACGGGCGCCGATCCTGGCGGTGGACCACCTGTCCATGCGCTTTGGCGGCCT GATCGCCGTGAATGACGTGTCCTTCGTCGCCGCCCGCGGCGAGGTGACGGCGGTGATCGGGCCCAACGGCGCCGGCAAGA CCACCGTGTTCAACTGCATCACCGGCTTCTACAAGCCGTCCGCCGGCCGCCTCGCCCTGTTCCACGGCGGCGCGGCGACG CCCGGCGAGCTCGATGCCGTCACCGCCTCCGGCCTGTCCTGGGGCCGCACCGGGGCGGGGGCGCTCTATCTGCTGGAGCG GCTGCCCGACCACAAGGTGGCGTCCTGGGCGCGGGTGGCCCGCACCTTCCAGAATATCCGCCTGTTCTCGGGCATGACCG TGCTGGAAAACCTGCTGGTGGCGCAGCACATGTCGCTCACCAGCGCCGGCCTGCTCAACCCCGCCGCCATCCTCAACCTG CCGTCCTGGAAGCGCCAGCAGAAGGGCGCCATGGACAAGGCCCTCTATTGGCTGCACCAGATCGGCCTGATGGAGCGTGC CGACGACCCGGCCGGCGACCTGCCCTATGGCGACCAGCGGCGCCTGGAGATCGCCCGCGCCATGTGCACCAACCCGGTGC TGCTCTGCCTCGACGAGCCGGCGGCGGGGCTAAACCCGCGCGAATCGGCGGCGCTCAACGAGCTGCTCCTCTCCATCCGG CGCGACCACGACACCTCGATCCTGCTCATCGAGCACGACATGTCGGTGGTGATGGAGATTTCCGACCACGTGGTCGTGCT GGAATATGGCTGCAAGATCGCCGACGGCACGCCGCAGGAGGTGCGCACCGATCCCAAGGTCATCGCCTCCTACCTCGGTG TCGAGGAGGAAGAGGCGGCCGTGGTGGAAGCGCAGGTGGGCGCATGA
Upstream 100 bases:
>100_bases TGTGGCGCCCGCGCGGCCTCGTCTCCTCGCGCCTGCCCACCATCTTCCTGAAGGAACGCAAGGCGGTCTCCTCGGCCCTC GTCAAGGAGGGCCACGGCTG
Downstream 100 bases:
>100_bases CGGCCCAGACCCTTGCCCCCGGAGCCGTGGCCGCCCAGCCGGCGCCGAAAGGCCAGCCGCTGCTGTCGGTCAGCGGCGTC ACCGCCTATTACGGCAAGAT
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MANLDPVAGARAPILAVDHLSMRFGGLIAVNDVSFVAARGEVTAVIGPNGAGKTTVFNCITGFYKPSAGRLALFHGGAAT PGELDAVTASGLSWGRTGAGALYLLERLPDHKVASWARVARTFQNIRLFSGMTVLENLLVAQHMSLTSAGLLNPAAILNL PSWKRQQKGAMDKALYWLHQIGLMERADDPAGDLPYGDQRRLEIARAMCTNPVLLCLDEPAAGLNPRESAALNELLLSIR RDHDTSILLIEHDMSVVMEISDHVVVLEYGCKIADGTPQEVRTDPKVIASYLGVEEEEAAVVEAQVGA
Sequences:
>Translated_308_residues MANLDPVAGARAPILAVDHLSMRFGGLIAVNDVSFVAARGEVTAVIGPNGAGKTTVFNCITGFYKPSAGRLALFHGGAAT PGELDAVTASGLSWGRTGAGALYLLERLPDHKVASWARVARTFQNIRLFSGMTVLENLLVAQHMSLTSAGLLNPAAILNL PSWKRQQKGAMDKALYWLHQIGLMERADDPAGDLPYGDQRRLEIARAMCTNPVLLCLDEPAAGLNPRESAALNELLLSIR RDHDTSILLIEHDMSVVMEISDHVVVLEYGCKIADGTPQEVRTDPKVIASYLGVEEEEAAVVEAQVGA >Mature_307_residues ANLDPVAGARAPILAVDHLSMRFGGLIAVNDVSFVAARGEVTAVIGPNGAGKTTVFNCITGFYKPSAGRLALFHGGAATP GELDAVTASGLSWGRTGAGALYLLERLPDHKVASWARVARTFQNIRLFSGMTVLENLLVAQHMSLTSAGLLNPAAILNLP SWKRQQKGAMDKALYWLHQIGLMERADDPAGDLPYGDQRRLEIARAMCTNPVLLCLDEPAAGLNPRESAALNELLLSIRR DHDTSILLIEHDMSVVMEISDHVVVLEYGCKIADGTPQEVRTDPKVIASYLGVEEEEAAVVEAQVGA
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1789864, Length=281, Percent_Identity=49.4661921708185, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1790525, Length=276, Percent_Identity=23.5507246376812, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788225, Length=274, Percent_Identity=26.6423357664234, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1786398, Length=258, Percent_Identity=29.4573643410853, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789032, Length=271, Percent_Identity=24.3542435424354, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789672, Length=275, Percent_Identity=21.8181818181818, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789593, Length=279, Percent_Identity=25.089605734767, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082268, Length=291, Percent_Identity=25.085910652921, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787370, Length=292, Percent_Identity=24.6575342465753, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI87081709, Length=277, Percent_Identity=23.4657039711191, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788644, Length=276, Percent_Identity=27.1739130434783, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788761, Length=282, Percent_Identity=24.113475177305, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1786872, Length=275, Percent_Identity=24, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1788210, Length=278, Percent_Identity=26.978417266187, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI48995001, Length=270, Percent_Identity=26.2962962962963, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788165, Length=278, Percent_Identity=26.2589928057554, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994997, Length=276, Percent_Identity=24.6376811594203, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790544, Length=275, Percent_Identity=24, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788450, Length=287, Percent_Identity=23.6933797909408, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87081834, Length=252, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789962, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787089, Length=255, Percent_Identity=23.921568627451, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787758, Length=258, Percent_Identity=24.031007751938, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788897, Length=267, Percent_Identity=23.9700374531835, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787164, Length=256, Percent_Identity=23.828125, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789586, Length=268, Percent_Identity=25.7462686567164, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790190, Length=244, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32943; Mature: 32812
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLDPVAGARAPILAVDHLSMRFGGLIAVNDVSFVAARGEVTAVIGPNGAGKTTVFNCI CCCCCCCCCCCCCEEEEEHHHHHHCCEEEECCCEEEEECCCEEEEECCCCCCCHHHHHHH TGFYKPSAGRLALFHGGAATPGELDAVTASGLSWGRTGAGALYLLERLPDHKVASWARVA HHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH RTFQNIRLFSGMTVLENLLVAQHMSLTSAGLLNPAAILNLPSWKRQQKGAMDKALYWLHQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCHHHHHHCCHHHHHHHHHH IGLMERADDPAGDLPYGDQRRLEIARAMCTNPVLLCLDEPAAGLNPRESAALNELLLSIR HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH RDHDTSILLIEHDMSVVMEISDHVVVLEYGCKIADGTPQEVRTDPKVIASYLGVEEEEAA CCCCCEEEEEECCCEEEEECCCCEEEEEECCEECCCCHHHHCCCHHHHHHHHCCCCHHHE VVEAQVGA EEEEECCC >Mature Secondary Structure ANLDPVAGARAPILAVDHLSMRFGGLIAVNDVSFVAARGEVTAVIGPNGAGKTTVFNCI CCCCCCCCCCCCEEEEEHHHHHHCCEEEECCCEEEEECCCEEEEECCCCCCCHHHHHHH TGFYKPSAGRLALFHGGAATPGELDAVTASGLSWGRTGAGALYLLERLPDHKVASWARVA HHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH RTFQNIRLFSGMTVLENLLVAQHMSLTSAGLLNPAAILNLPSWKRQQKGAMDKALYWLHQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCHHHHHHCCHHHHHHHHHH IGLMERADDPAGDLPYGDQRRLEIARAMCTNPVLLCLDEPAAGLNPRESAALNELLLSIR HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH RDHDTSILLIEHDMSVVMEISDHVVVLEYGCKIADGTPQEVRTDPKVIASYLGVEEEEAA CCCCCEEEEEECCCEEEEECCCCEEEEEECCEECCCCHHHHCCCHHHHHHHHCCCCHHHE VVEAQVGA EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]