Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yfjG [C]
Identifier: 154247821
GI number: 154247821
Start: 4316400
End: 4316858
Strand: Direct
Name: yfjG [C]
Synonym: Xaut_3898
Alternate gene names: 154247821
Gene position: 4316400-4316858 (Clockwise)
Preceding gene: 154247820
Following gene: 154247823
Centisome position: 81.3
GC content: 66.67
Gene sequence:
>459_bases GTGCCATCCTTCTCCAACGCCCGGCAGGTGAGGCACGGGGCGCGGGACATGTTCGACCTCGTGGCCGACGTGGAGCGCTA TCCCGAGTTCGTGCCCCTGTGCCAGTCGCTGCGGGTGAAGCGGCGCATGAAGTCCGACGAGGGCGTGGAGATCCTGGTGG CGGACATGACCGTCGCCTACAAGCTGATCCGCGAGACCTTCACCTCGCGGGTGACGCTGGACCGGCCCCGCCTCACCATC CATGTGGAATATCTCGACGGCCCCTTCAGCCGGCTCGACAACCGCTGGGACTTTGTCGGGCGCGGTGACGACGCGAGCGA GGTGAAATTCTTCATCTCCTACGAATTCCGCTCGCGCACCCTGGCCATGCTCATGGGCGCCATGTTCGATGCCGCCTTCC GCCGCTTCGCCGACGCCTTCGAGGCCCGCGCGGACCAGGTCTACGGCACGGTGGGGTAG
Upstream 100 bases:
>100_bases TGGTTTCGGCGAGCCCGCTCACGCGCTCGTCGCACCATGCGGGCGATGATTTCGAGAAATTGCGCGCGGCCCGGGTGGCG CGTCTCGGCCGGTCCTGATC
Downstream 100 bases:
>100_bases GGGGCTTAGGCCTCCACCGGTCCGCCCGCGTCCTTCCAGGCCTTGAAGCCGCCGCCCACATGGGCCACCGGATCCAGCCC CATGTCCTGCGCCGTGACCG
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPSFSNARQVRHGARDMFDLVADVERYPEFVPLCQSLRVKRRMKSDEGVEILVADMTVAYKLIRETFTSRVTLDRPRLTI HVEYLDGPFSRLDNRWDFVGRGDDASEVKFFISYEFRSRTLAMLMGAMFDAAFRRFADAFEARADQVYGTVG
Sequences:
>Translated_152_residues MPSFSNARQVRHGARDMFDLVADVERYPEFVPLCQSLRVKRRMKSDEGVEILVADMTVAYKLIRETFTSRVTLDRPRLTI HVEYLDGPFSRLDNRWDFVGRGDDASEVKFFISYEFRSRTLAMLMGAMFDAAFRRFADAFEARADQVYGTVG >Mature_151_residues PSFSNARQVRHGARDMFDLVADVERYPEFVPLCQSLRVKRRMKSDEGVEILVADMTVAYKLIRETFTSRVTLDRPRLTIH VEYLDGPFSRLDNRWDFVGRGDDASEVKFFISYEFRSRTLAMLMGAMFDAAFRRFADAFEARADQVYGTVG
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=148, Percent_Identity=31.0810810810811, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 17609; Mature: 17478
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFSNARQVRHGARDMFDLVADVERYPEFVPLCQSLRVKRRMKSDEGVEILVADMTVAY CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH KLIRETFTSRVTLDRPRLTIHVEYLDGPFSRLDNRWDFVGRGDDASEVKFFISYEFRSRT HHHHHHHHHCEEECCCEEEEEEEECCCHHHHHCCCCCCCCCCCCHHHEEEEEEEHHHHHH LAMLMGAMFDAAFRRFADAFEARADQVYGTVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PSFSNARQVRHGARDMFDLVADVERYPEFVPLCQSLRVKRRMKSDEGVEILVADMTVAY CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHH KLIRETFTSRVTLDRPRLTIHVEYLDGPFSRLDNRWDFVGRGDDASEVKFFISYEFRSRT HHHHHHHHHCEEECCCEEEEEEEECCCHHHHHCCCCCCCCCCCCHHHEEEEEEEHHHHHH LAMLMGAMFDAAFRRFADAFEARADQVYGTVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]