Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is tauC [C]
Identifier: 154247682
GI number: 154247682
Start: 4161799
End: 4162569
Strand: Direct
Name: tauC [C]
Synonym: Xaut_3758
Alternate gene names: 154247682
Gene position: 4161799-4162569 (Clockwise)
Preceding gene: 154247681
Following gene: 154247683
Centisome position: 78.39
GC content: 65.24
Gene sequence:
>771_bases ATGAAGCTCTCCGCCGAGGATATCGCCCCCGTCGCCTTCACCGTGGGCCTGTTCGTGATCTGGGAGGCGGCGTGCCGCCT GTTCCGGATCGACACCTTCATCCTGCCCGCGCCCACCGATATTTTCGCCGCCATGGGCAAATACTGGTGGCCGCTGCTCA AAAACTCCTTCGTCACCCTGTGGACCACCATGGCCGGCTTTGCCATCGCCGTGGTGTTCGGCATCGCGTTGGGCATGGTT GTGGGCTGGTCGCGCACCATCTATCGCGGGCTCTACCCGGTGATGATCGGGTTCAACTCGGTGCCCAAGGTGGCGGTGGT GCCCATCCTCATCATGTGGTTCGGCATCGGCGAGATCCCTGCCATCCTCACCGCCTTCCTCATCTCCTTCTTTCCCATCG TGGTGAACGTGGCCACCGGCCTTGCTACCACCGAGCCGGAGCTGGAAGACGTGCTGCGGGCACTGGGCGCCTCCAAACTC GACATCATGCGCAAGGTGGGCATCCCGCGCACCGGCCCCTATCTGTTCGGGGCGCTGAAGGTGGGCATCACGCTCGCCTT CGTCGGCGCGGTGGTGTCGGAGACCATCGGCGCCAATGCGGGGGTGGGTCATCTGATGGTGCAGGCGGGTTCCAACTTCC AGATGCCGCTGGTGTTCGCGGGCCTGCTGGCGCTCGCGGTGGAGGGCATCCTCATGTACGCCATTTTCGCCGCCTTCGAG CGCCGCATGGTGGCCTGGGCGTTCCGCTCCTCCACCGGCGCGGGAGGCTGA
Upstream 100 bases:
>100_bases CCGCGCGATCTCGATGTCTGCTACACGCCGGACTTCACCCAGCTGGTGCACGAACTGCGCGGCAAGATCGCCGAAGCCCG GCAGGCGGCGTGAGATGAAG
Downstream 100 bases:
>100_bases CCGGGTGGCCATCGCCTTCGTGCTGAACGGCGAAAGCGTGCGGGAGGCGACAGCTGCCCCCTCCACGACCGTGCTCGATT ATCTGCGCACAAGAGCCCAT
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKLSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAMGKYWWPLLKNSFVTLWTTMAGFAIAVVFGIALGMV VGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL DIMRKVGIPRTGPYLFGALKVGITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVEGILMYAIFAAFE RRMVAWAFRSSTGAGG
Sequences:
>Translated_256_residues MKLSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAMGKYWWPLLKNSFVTLWTTMAGFAIAVVFGIALGMV VGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL DIMRKVGIPRTGPYLFGALKVGITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVEGILMYAIFAAFE RRMVAWAFRSSTGAGG >Mature_256_residues MKLSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAMGKYWWPLLKNSFVTLWTTMAGFAIAVVFGIALGMV VGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL DIMRKVGIPRTGPYLFGALKVGITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVEGILMYAIFAAFE RRMVAWAFRSSTGAGG
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=28.1632653061224, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=27.9166666666667, Blast_Score=85, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27446; Mature: 27446
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAMGKYWWPLLKNSFVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCHHHH WTTMAGFAIAVVFGIALGMVVGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIGEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH AILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTGPYLFGALK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH VGITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVEGILMYAIFAAFE HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRMVAWAFRSSTGAGG HHHHHHHHHCCCCCCC >Mature Secondary Structure MKLSAEDIAPVAFTVGLFVIWEAACRLFRIDTFILPAPTDIFAAMGKYWWPLLKNSFVTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCHHHH WTTMAGFAIAVVFGIALGMVVGWSRTIYRGLYPVMIGFNSVPKVAVVPILIMWFGIGEIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH AILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTGPYLFGALK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH VGITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVEGILMYAIFAAFE HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRMVAWAFRSSTGAGG HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA