Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154247629

Identifier: 154247629

GI number: 154247629

Start: 4107997

End: 4109337

Strand: Direct

Name: 154247629

Synonym: Xaut_3704

Alternate gene names: NA

Gene position: 4107997-4109337 (Clockwise)

Preceding gene: 154247628

Following gene: 154247630

Centisome position: 77.38

GC content: 65.1

Gene sequence:

>1341_bases
ATGACGGTTCCGCAATCGACCTTCTCGCTCGCCGCCTCGATCGCATCGCTTCCCGTAGCGGAGAGGGCCCGGGTTCTGGC
GGGACTGACGAAGAAGCAGGCTGAACAGCTCCTTTGGGACTGGAAGTTCTGGGCACGGCCCAATCAGCTGCCGCCGCCAG
GGGACTGGCTCACGTGGCTCATCCTCGCTGGGCGGGGATATGGCAAGACCCGCACTGGGGCCGAGTGGGTTCGCTCCGTC
GTTTGCGGGGCAACACCGCTATCGCGGGGCATCCTGGGGCGGATTGCCCTTGTGGCCGAGACCGCTGCCGATGCCCGCGA
CGTGATGGTCGAAGGCGAGAGCGGCATTCTCTCGGTGCATCCGAAAGCCTTCAGGCCGCTCTATGAGCCGTCGAAGCGGC
GTCTGACTTGGCCGAATGGCGCCGTGGCGACGCTCTACAATGCGGTTGAGCCTGATCAGCTTCGTGGGCCGCAGCACGAT
GGCGCCTGGTGCGACGAGCTTGCGAAATGGCGTTACGCGGGCGAGACGTGGGATCAGCTGCAGTTCGGTCTGCGCCTCGG
CGACAAGCCCCGCCAAGTGGTGACGACGACGCCCCGGCCGATCCCGGTGCTGAAGCAGATCATCGCGGCTGGAACGAGCC
GGGTCACGCGCGGATCGACCCATGAAAACCGGGCGAACCTCGCCTCCACCTTCCTCGCGGAAGTGGTGAAAAAATACGAG
GGCACCAGACTCGGAAGGCAGGAACTGAACGCCGAGATCCTCGACGATGTGCCTGGCGCGCTTTGGACGCGGGACATGCT
GGATATGTCGAGGGTCGGGTTTCCTCCCGATCTGGTCCGGGTCGTCGTCGCCGTTGACCCATCTGGCACCAAGGGCGCCG
AGGACGACGGCGACGCCATCGGAATCGTCGCCGCTGGCTGCGGGGTGGATGGACGGGCCTACTTGCTTGAAGACGCGAGT
TGCAAGCTGCCGCCTGCCGGCTGGGGCCGCCGAGCCATCGAAGTTTTCAAGAGATGGGACGCCGATCGTCTGATCGCCGA
GCGCAATTTCGGCGGCGCCATGGTGGAGCACGTCATCAGGTCCATCGACCCCGACGTCTCGTTTCGAGAAGTGACCGCGA
GCCGCGGGAAGGTGGCGCGCGCGGAGCCGATCGCCGCTCTTTACGAGCAGAAGAAGGTGTCCCACGTCGGGTCGTTCCCT
GATCTGGAAGACCAGATGTGCTCGTTCACCCCGAGTGGATACATCGGCGCGGGTTCGCCGGATCGAGCTGATGCGGCGGT
GTGGGCGCTCACCGAATTGATGCTCGGGCCGTCCCCCTTCACCTGGTTCGTCGGAAACTGA

Upstream 100 bases:

>100_bases
CTGGAGAAGCTGACGCGGGTTCGTGCGCGGCTGATCCCCCTGGAGCGGCAGGCCTACAACCTTGACGCCGAGGAGCGCGA
CCCCAGCGACCCTGATAGCC

Downstream 100 bases:

>100_bases
AGGGCCACTACATGGCATCCTGGTGGCCCTTCGGCCGGCGTTCGCAAACCAAGGCGAGCGCCGCCGGCTCGGTGATTTCG
GCGTGGAATGTCGGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSV
VCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHD
GAWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE
GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDAS
CKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFP
DLEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN

Sequences:

>Translated_446_residues
MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSV
VCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHD
GAWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE
GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDAS
CKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFP
DLEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN
>Mature_445_residues
TVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSVV
CGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDG
AWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYEG
TRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDASC
KLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPD
LEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN

Specific function: Unknown

COG id: COG5323

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48665; Mature: 48534

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWL
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ILAGRGYGKTRTGAEWVRSVVCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVH
HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEC
PKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDGAWCDELAKWRYAGETWDQL
HHHHCCCCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHH
QFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAI
CCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCEE
GIVAAGCGVDGRAYLLEDASCKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIR
EEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH
SIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPDLEDQMCSFTPSGYIGAGSP
HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
DRADAAVWALTELMLGPSPFTWFVGN
CHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
TVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ILAGRGYGKTRTGAEWVRSVVCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVH
HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEC
PKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDGAWCDELAKWRYAGETWDQL
HHHHCCCCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHH
QFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAI
CCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCEE
GIVAAGCGVDGRAYLLEDASCKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIR
EEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH
SIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPDLEDQMCSFTPSGYIGAGSP
HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
DRADAAVWALTELMLGPSPFTWFVGN
CHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA