Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247629
Identifier: 154247629
GI number: 154247629
Start: 4107997
End: 4109337
Strand: Direct
Name: 154247629
Synonym: Xaut_3704
Alternate gene names: NA
Gene position: 4107997-4109337 (Clockwise)
Preceding gene: 154247628
Following gene: 154247630
Centisome position: 77.38
GC content: 65.1
Gene sequence:
>1341_bases ATGACGGTTCCGCAATCGACCTTCTCGCTCGCCGCCTCGATCGCATCGCTTCCCGTAGCGGAGAGGGCCCGGGTTCTGGC GGGACTGACGAAGAAGCAGGCTGAACAGCTCCTTTGGGACTGGAAGTTCTGGGCACGGCCCAATCAGCTGCCGCCGCCAG GGGACTGGCTCACGTGGCTCATCCTCGCTGGGCGGGGATATGGCAAGACCCGCACTGGGGCCGAGTGGGTTCGCTCCGTC GTTTGCGGGGCAACACCGCTATCGCGGGGCATCCTGGGGCGGATTGCCCTTGTGGCCGAGACCGCTGCCGATGCCCGCGA CGTGATGGTCGAAGGCGAGAGCGGCATTCTCTCGGTGCATCCGAAAGCCTTCAGGCCGCTCTATGAGCCGTCGAAGCGGC GTCTGACTTGGCCGAATGGCGCCGTGGCGACGCTCTACAATGCGGTTGAGCCTGATCAGCTTCGTGGGCCGCAGCACGAT GGCGCCTGGTGCGACGAGCTTGCGAAATGGCGTTACGCGGGCGAGACGTGGGATCAGCTGCAGTTCGGTCTGCGCCTCGG CGACAAGCCCCGCCAAGTGGTGACGACGACGCCCCGGCCGATCCCGGTGCTGAAGCAGATCATCGCGGCTGGAACGAGCC GGGTCACGCGCGGATCGACCCATGAAAACCGGGCGAACCTCGCCTCCACCTTCCTCGCGGAAGTGGTGAAAAAATACGAG GGCACCAGACTCGGAAGGCAGGAACTGAACGCCGAGATCCTCGACGATGTGCCTGGCGCGCTTTGGACGCGGGACATGCT GGATATGTCGAGGGTCGGGTTTCCTCCCGATCTGGTCCGGGTCGTCGTCGCCGTTGACCCATCTGGCACCAAGGGCGCCG AGGACGACGGCGACGCCATCGGAATCGTCGCCGCTGGCTGCGGGGTGGATGGACGGGCCTACTTGCTTGAAGACGCGAGT TGCAAGCTGCCGCCTGCCGGCTGGGGCCGCCGAGCCATCGAAGTTTTCAAGAGATGGGACGCCGATCGTCTGATCGCCGA GCGCAATTTCGGCGGCGCCATGGTGGAGCACGTCATCAGGTCCATCGACCCCGACGTCTCGTTTCGAGAAGTGACCGCGA GCCGCGGGAAGGTGGCGCGCGCGGAGCCGATCGCCGCTCTTTACGAGCAGAAGAAGGTGTCCCACGTCGGGTCGTTCCCT GATCTGGAAGACCAGATGTGCTCGTTCACCCCGAGTGGATACATCGGCGCGGGTTCGCCGGATCGAGCTGATGCGGCGGT GTGGGCGCTCACCGAATTGATGCTCGGGCCGTCCCCCTTCACCTGGTTCGTCGGAAACTGA
Upstream 100 bases:
>100_bases CTGGAGAAGCTGACGCGGGTTCGTGCGCGGCTGATCCCCCTGGAGCGGCAGGCCTACAACCTTGACGCCGAGGAGCGCGA CCCCAGCGACCCTGATAGCC
Downstream 100 bases:
>100_bases AGGGCCACTACATGGCATCCTGGTGGCCCTTCGGCCGGCGTTCGCAAACCAAGGCGAGCGCCGCCGGCTCGGTGATTTCG GCGTGGAATGTCGGCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSV VCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHD GAWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDAS CKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFP DLEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN
Sequences:
>Translated_446_residues MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSV VCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHD GAWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDAS CKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFP DLEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN >Mature_445_residues TVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWLILAGRGYGKTRTGAEWVRSVV CGATPLSRGILGRIALVAETAADARDVMVEGESGILSVHPKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDG AWCDELAKWRYAGETWDQLQFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYEG TRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAIGIVAAGCGVDGRAYLLEDASC KLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIRSIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPD LEDQMCSFTPSGYIGAGSPDRADAAVWALTELMLGPSPFTWFVGN
Specific function: Unknown
COG id: COG5323
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48665; Mature: 48534
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH ILAGRGYGKTRTGAEWVRSVVCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVH HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEC PKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDGAWCDELAKWRYAGETWDQL HHHHCCCCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHH QFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAI CCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCEE GIVAAGCGVDGRAYLLEDASCKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIR EEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH SIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPDLEDQMCSFTPSGYIGAGSP HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC DRADAAVWALTELMLGPSPFTWFVGN CHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure TVPQSTFSLAASIASLPVAERARVLAGLTKKQAEQLLWDWKFWARPNQLPPPGDWLTWL CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH ILAGRGYGKTRTGAEWVRSVVCGATPLSRGILGRIALVAETAADARDVMVEGESGILSVH HHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEC PKAFRPLYEPSKRRLTWPNGAVATLYNAVEPDQLRGPQHDGAWCDELAKWRYAGETWDQL HHHHCCCCCCCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCHHHH QFGLRLGDKPRQVVTTTPRPIPVLKQIIAAGTSRVTRGSTHENRANLASTFLAEVVKKYE HHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GTRLGRQELNAEILDDVPGALWTRDMLDMSRVGFPPDLVRVVVAVDPSGTKGAEDDGDAI CCCCCHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCCCEE GIVAAGCGVDGRAYLLEDASCKLPPAGWGRRAIEVFKRWDADRLIAERNFGGAMVEHVIR EEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH SIDPDVSFREVTASRGKVARAEPIAALYEQKKVSHVGSFPDLEDQMCSFTPSGYIGAGSP HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC DRADAAVWALTELMLGPSPFTWFVGN CHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA