Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is icfG [H]
Identifier: 154246735
GI number: 154246735
Start: 3114508
End: 3115869
Strand: Reverse
Name: icfG [H]
Synonym: Xaut_2796
Alternate gene names: 154246735
Gene position: 3115869-3114508 (Counterclockwise)
Preceding gene: 154246736
Following gene: 154246734
Centisome position: 58.69
GC content: 69.38
Gene sequence:
>1362_bases ATGCCGCCACTGACGTTACGACAGGATGAGGCGCCCCGCCTCGACCCGGAAGAGGTCTCCTCCGCCACCGCGATGATGGC GCGGCATCCCTATTTTGCCGACTTCCCGCCCGCCGTGCTGGCCGCGCTCATCGCCGGCGGCGAGAAGATGGTGGTACCGC CGGGCACCCGCCTGATCCAGCGGGGCGATACCGACACCTTCGCCCTGCTGGTGGTGGAGGGCACGGCGGTGGTCACCATC GATACCCCCTATGCCCATGTGGAGCTGGCCCATCTGGCGGCCCCCGCGGTGATCGGCGAGATCGCGGCCTTCACCGGCGT CGCCCGCACCGCTCATGTGGATGCCGCCACGCAACTTACCGCCATCCGGCTCCCGGCCGAGGCGCTGGAGGCGGCGGGCC GCGCCCATCCCGCCCTGCTGTCGGCGGTGATGCGCCAGTTCGGCAGCCGGTTCGAGACCTTCAACCGCGTCTTCGGCTTC TATGCCAATGCGCTGAACGCGCTGGAGCGCCGCGAGTTCGACCTGAAGCTGCTGGACGAGCTGCGCAATCCCCTGCCGGA ACTGGTGGATTTCTCCCACTCCTTCCGCCGCCTCGCCGAGGCCATCATGACGCGGGTGGCGGAGCGACGCGAGATGGCCA ATGCCGCCGCCATCCAGCGTTCCATGCTGCCGCTGCCGCTTGCGGCGGATGTGCTCGGCGGGCGCGCCGACATCGCCGCC GCCATGCGTCCGGCCAAGGACGTGGGCGGCGATTTCTACGATTATTTCCTCATCGATGCCCGCCACCTGATGGTCAGTCT CGGCGACGTGGCCGGCAAGGGCACCCCCGCCGCCCTGTTCATGAGCGCCACCCAGACCGCCCTGCGCATGGTGCTGCGAC GGGAGGCGGATCTCTCCACCGCGGTGGCCACGGTGAACGACCTCCTGTGCGCCACCAACGGGGAGGACATGTTCGTCACC CTGTTCTGTGCCGTGATCGACCTTGAGACCGGCGATCTCACCTACTGCAATTGCGGCCACACCGACGCGATGATCCTGCG CGCGGACGGCGCCATCGAGCGCCCGGCGGCCACCGGCATGGCGCTTGCCATCCTGGAGGGGATGAAGCCCCGCGCCGTCT CAAGCCGTCTTGCCCCGGGTGACCGGCTGTTCCTGTTCTCCGACGGCCTGACCGATGCCATCAACCTGGACGAGGTCTCG TTCGGCGACGCGCGGTTGGAAGCGGCGGCGACGCGCGCGCTGCACCTGCCGGCCGAGGCTTTCCTCGCCACATTGCTCGA CACGGCCGCCGCCCATTCGGGGGCAGCGCCGCAGTTCGACGACATGACCGCGCTCGCCGTCACCTTCACGCCCGTGGGCT GA
Upstream 100 bases:
>100_bases GGTGCTGTTCGCGGTGCTGTCGCGGGCGCTGCGCATCCTGCGTTTGGGTTAAAGTCGCCGGCCGGACCTGGGTTATAGTG GTCGCGCCCAAGGAAAACCC
Downstream 100 bases:
>100_bases AGACCACTCACGCCGGTAAAGCCTTGGCGTGAGGCGCCCCGCCGCAGATTCCATGAGAGCGCTGGAGCGCCGCACCGTCC TGGTGGCTTCCTTGGTGACT
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPPLTLRQDEAPRLDPEEVSSATAMMARHPYFADFPPAVLAALIAGGEKMVVPPGTRLIQRGDTDTFALLVVEGTAVVTI DTPYAHVELAHLAAPAVIGEIAAFTGVARTAHVDAATQLTAIRLPAEALEAAGRAHPALLSAVMRQFGSRFETFNRVFGF YANALNALERREFDLKLLDELRNPLPELVDFSHSFRRLAEAIMTRVAERREMANAAAIQRSMLPLPLAADVLGGRADIAA AMRPAKDVGGDFYDYFLIDARHLMVSLGDVAGKGTPAALFMSATQTALRMVLRREADLSTAVATVNDLLCATNGEDMFVT LFCAVIDLETGDLTYCNCGHTDAMILRADGAIERPAATGMALAILEGMKPRAVSSRLAPGDRLFLFSDGLTDAINLDEVS FGDARLEAAATRALHLPAEAFLATLLDTAAAHSGAAPQFDDMTALAVTFTPVG
Sequences:
>Translated_453_residues MPPLTLRQDEAPRLDPEEVSSATAMMARHPYFADFPPAVLAALIAGGEKMVVPPGTRLIQRGDTDTFALLVVEGTAVVTI DTPYAHVELAHLAAPAVIGEIAAFTGVARTAHVDAATQLTAIRLPAEALEAAGRAHPALLSAVMRQFGSRFETFNRVFGF YANALNALERREFDLKLLDELRNPLPELVDFSHSFRRLAEAIMTRVAERREMANAAAIQRSMLPLPLAADVLGGRADIAA AMRPAKDVGGDFYDYFLIDARHLMVSLGDVAGKGTPAALFMSATQTALRMVLRREADLSTAVATVNDLLCATNGEDMFVT LFCAVIDLETGDLTYCNCGHTDAMILRADGAIERPAATGMALAILEGMKPRAVSSRLAPGDRLFLFSDGLTDAINLDEVS FGDARLEAAATRALHLPAEAFLATLLDTAAAHSGAAPQFDDMTALAVTFTPVG >Mature_452_residues PPLTLRQDEAPRLDPEEVSSATAMMARHPYFADFPPAVLAALIAGGEKMVVPPGTRLIQRGDTDTFALLVVEGTAVVTID TPYAHVELAHLAAPAVIGEIAAFTGVARTAHVDAATQLTAIRLPAEALEAAGRAHPALLSAVMRQFGSRFETFNRVFGFY ANALNALERREFDLKLLDELRNPLPELVDFSHSFRRLAEAIMTRVAERREMANAAAIQRSMLPLPLAADVLGGRADIAAA MRPAKDVGGDFYDYFLIDARHLMVSLGDVAGKGTPAALFMSATQTALRMVLRREADLSTAVATVNDLLCATNGEDMFVTL FCAVIDLETGDLTYCNCGHTDAMILRADGAIERPAATGMALAILEGMKPRAVSSRLAPGDRLFLFSDGLTDAINLDEVSF GDARLEAAATRALHLPAEAFLATLLDTAAAHSGAAPQFDDMTALAVTFTPVG
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 48289; Mature: 48158
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLTLRQDEAPRLDPEEVSSATAMMARHPYFADFPPAVLAALIAGGEKMVVPPGTRLIQ CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH RGDTDTFALLVVEGTAVVTIDTPYAHVELAHLAAPAVIGEIAAFTGVARTAHVDAATQLT CCCCCEEEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE AIRLPAEALEAAGRAHPALLSAVMRQFGSRFETFNRVFGFYANALNALERREFDLKLLDE EEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LRNPLPELVDFSHSFRRLAEAIMTRVAERREMANAAAIQRSMLPLPLAADVLGGRADIAA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH AMRPAKDVGGDFYDYFLIDARHLMVSLGDVAGKGTPAALFMSATQTALRMVLRREADLST HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH AVATVNDLLCATNGEDMFVTLFCAVIDLETGDLTYCNCGHTDAMILRADGAIERPAATGM HHHHHHHHHEECCCCCHHHHEEHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHH ALAILEGMKPRAVSSRLAPGDRLFLFSDGLTDAINLDEVSFGDARLEAAATRALHLPAEA HHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH FLATLLDTAAAHSGAAPQFDDMTALAVTFTPVG HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure PPLTLRQDEAPRLDPEEVSSATAMMARHPYFADFPPAVLAALIAGGEKMVVPPGTRLIQ CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH RGDTDTFALLVVEGTAVVTIDTPYAHVELAHLAAPAVIGEIAAFTGVARTAHVDAATQLT CCCCCEEEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHE AIRLPAEALEAAGRAHPALLSAVMRQFGSRFETFNRVFGFYANALNALERREFDLKLLDE EEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LRNPLPELVDFSHSFRRLAEAIMTRVAERREMANAAAIQRSMLPLPLAADVLGGRADIAA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH AMRPAKDVGGDFYDYFLIDARHLMVSLGDVAGKGTPAALFMSATQTALRMVLRREADLST HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH AVATVNDLLCATNGEDMFVTLFCAVIDLETGDLTYCNCGHTDAMILRADGAIERPAATGM HHHHHHHHHEECCCCCHHHHEEHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHH ALAILEGMKPRAVSSRLAPGDRLFLFSDGLTDAINLDEVSFGDARLEAAATRALHLPAEA HHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH FLATLLDTAAAHSGAAPQFDDMTALAVTFTPVG HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]