Click here to switch to the map view.

The map label for this gene is dsbD [C]

Identifier: 154246660

GI number: 154246660

Start: 3016468

End: 3017205

Strand: Reverse

Name: dsbD [C]

Synonym: Xaut_2721

Alternate gene names: 154246660

Gene position: 3017205-3016468 (Counterclockwise)

Preceding gene: 154246661

Following gene: 154246659

Centisome position: 56.83

GC content: 73.44

Gene sequence:

>738_bases
ATGGCCCTCGAAAGCCTCGCCTTCGGCAGCTTCGCCCTCGCCTTCATGGCGGGGGTCCTCTCCGTGCTCTCGCCCTGCGT
GGTGCCGCTCCTGCCCATCGTGCTCGGGGCGGCGGCGGCCGAGCATCGCCTGGCGCCGGTGGCGCTGGCGGCGGGGGTGG
CCATCTCCTTCGTCACCATCGGGCTGTTCGTGGCCACCATCGGCTATGCCATCGGCCTGGAGGGCGATGTGTTCCGCATC
CTCGCCGCGCTGTTGATGGTGGGCATCGGCACCGTGCTGGCGGTGCCGCAGCTTCAGACCCGCCTCGCTGCCGCCGGCGG
GCCGGTGAGCGACCTTGCGGCCCGCCGGCTCGACGGTTTCTCCCGCGCCGGCATCGGCGGTCAGTTCGCCGTGGGCCTGC
TGCTCGGGGCGGTGTGGAGCCCCTGCGTCGGTCCCACCCTGGGAGCCGCCTCCGTGCTGGCGGCACAGGGGCAGAGCCTG
CCGCAGGTGGCGGGGGTAATGGCCCTGTTCGGCCTCGGCGCCGGCCTGCCCCTGGCGCTGCTGGGCACCTTGTTCCGCCC
GGCGCTGGCGCGCTGGCGCGGCCGCCTGCTGGGCGCCGGAAAGGGGGCGAAGGCGGTGCTGGGGCTGGTTCTGGTGCTGG
TGGGCATGATGATCCTCACCGGGACCGACAAGCGACTGGAATCGGCGCTGGTGGCCGCCTCCCCGGCCTGGCTCACCACC
CTCACCACGCGGTTTTAG

Upstream 100 bases:

>100_bases
CTGATCACCTTCAAGGGCACCACCGAGACCGGGCGCTCCGTGGGCGACACCCACAAGGGCTCCATCGAGGCCCTGCTCTC
CCACGCCATCTGAGGCGATC

Downstream 100 bases:

>100_bases
ACGCTCAGGCGCCGCGCGGGGCTCGACACGCTCAAGCGCCACGCGGGCTTGGCCCCTGCGCAAAGCACACGGGCGTGGCC
ATCCCATCGTTTTTCCGAGC

Product: cytochrome c biogenesis protein transmembrane subunit

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: Cytochrome C Biogenesis Protein; Cytochrome C-Type Biogenesis Protein; Cytochrome C Biogenesis Protein Transmembrane Protein; Membrane Assocaited Cytochrome C-Type Biogenesis Protein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MALESLAFGSFALAFMAGVLSVLSPCVVPLLPIVLGAAAAEHRLAPVALAAGVAISFVTIGLFVATIGYAIGLEGDVFRI
LAALLMVGIGTVLAVPQLQTRLAAAGGPVSDLAARRLDGFSRAGIGGQFAVGLLLGAVWSPCVGPTLGAASVLAAQGQSL
PQVAGVMALFGLGAGLPLALLGTLFRPALARWRGRLLGAGKGAKAVLGLVLVLVGMMILTGTDKRLESALVAASPAWLTT
LTTRF

Sequences:

>Translated_245_residues
MALESLAFGSFALAFMAGVLSVLSPCVVPLLPIVLGAAAAEHRLAPVALAAGVAISFVTIGLFVATIGYAIGLEGDVFRI
LAALLMVGIGTVLAVPQLQTRLAAAGGPVSDLAARRLDGFSRAGIGGQFAVGLLLGAVWSPCVGPTLGAASVLAAQGQSL
PQVAGVMALFGLGAGLPLALLGTLFRPALARWRGRLLGAGKGAKAVLGLVLVLVGMMILTGTDKRLESALVAASPAWLTT
LTTRF
>Mature_244_residues
ALESLAFGSFALAFMAGVLSVLSPCVVPLLPIVLGAAAAEHRLAPVALAAGVAISFVTIGLFVATIGYAIGLEGDVFRIL
AALLMVGIGTVLAVPQLQTRLAAAGGPVSDLAARRLDGFSRAGIGGQFAVGLLLGAVWSPCVGPTLGAASVLAAQGQSLP
QVAGVMALFGLGAGLPLALLGTLFRPALARWRGRLLGAGKGAKAVLGLVLVLVGMMILTGTDKRLESALVAASPAWLTTL
TTRF

Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 24517; Mature: 24386

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCC
>Mature Secondary Structure 
ALESLAFGSFALAFMAGVLSVLSPCVVPLLPIVLGAAAAEHRLAPVALAAGVAISFVTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFVATIGYAIGLEGDVFRILAALLMVGIGTVLAVPQLQTRLAAAGGPVSDLAARRLDGF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
SRAGIGGQFAVGLLLGAVWSPCVGPTLGAASVLAAQGQSLPQVAGVMALFGLGAGLPLAL
HHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
LGTLFRPALARWRGRLLGAGKGAKAVLGLVLVLVGMMILTGTDKRLESALVAASPAWLTT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
LTTRF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA