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The map label for this gene is glpC [H]

Identifier: 154246659

GI number: 154246659

Start: 3014862

End: 3016337

Strand: Reverse

Name: glpC [H]

Synonym: Xaut_2720

Alternate gene names: 154246659

Gene position: 3016337-3014862 (Counterclockwise)

Preceding gene: 154246660

Following gene: 154246657

Centisome position: 56.82

GC content: 69.58

Gene sequence:

>1476_bases
GTGGAACCGGCTCCGGGGCGCCATCGCCCTTCTCGTGCCCTGGAGCCGGCCCTCTTCGCCTCGGGTACGCATCTTGCTTC
GCCGGGCGCGAACGGGGCCCGCGGCATGAAAACCTTCCTCGACTGGTCGGCTTACGACACATATGGCATCGGCGACGCCT
ATTCCGGCATTCCCGCCACCGGCGGGAACTACGCGAAGGCGGTGGCCGTGTGCATGCACAGCCGCGATTGTCGCAATACC
GGCAAGGGCGTCATGTGCCCGAGCTACCGCATTACCGGCGACAAGGACCATTCCACGGAAGCCCGCGTCGCCGCCTTCAA
GGCGGCGCTGAACGACGGCACCGACGCCAACGCCTTCGCCGATCCCCGGCTCGACGCGGCCATGGACCTGTGCGTGTCCT
GCAAGGCCTGCAAGAAGGAATGCCCCAGCGCCGTGGACATGACGCTGATCAAGACCGAGTACCTCGCCCAGCGCCACGAG
ATCAAAGGCGTGCCCCGGCGCACCCGGCTGTTCGGCGGGGTGCCGGAATGGACCGGCCGCCACCGCCGCCTGCTGCGCCT
CGCCATCATGCTGCGCAACCGGTCGCGGCTTCTGACCCAGGCCGCAGAAAAGCTGCTGGGCATCAGCGCCCGCCGCGCCA
TCCCCGAGCCGGCGCCCCGCCCCTATGCGGAGCCGTCTGCCGTGCCCACGCCGGCACACGCCCCGGCCCCACGCGGCGAG
GTGATCCTGTTCGTGGACACCTTCTGCCACCATTTCGAGCCGGAGGTGGCGGAGGCCGCCCACGCGGTGCTGACCCACGC
CGGCTATAGCGTGCGCATCGCCCAGCCCGATCCCGCCGATGCCGAGCCCGACCGGCCCCTGTGCTGCGGCCGCACGTACC
TGACCACCGGCATGGTGGAGAAGGCACGTGGCGAGGGACAGCGCGTGCTCGCGGCCTTCCGCAAGGAGATCGCGGCGCAG
ACCCCCATCATCGGGCTGGAGCCCTCGTGCCTGCTCTCCCTGCGCGACGAGCTTTACAGCCTCGGCCTCGGGCCGGAGGT
GGGGGCGCTGGGCAAGCAATTGTTCCTGCTGGAGGAGTTCCTCGCCCGCGAGCACCAGAACAAGGGGCTGCGGATGCGGC
TGAAGCCTTTGCCCGGCCCGAAGGCGGTGCTGCACGGCCACTGCCACCAGAAGGCGTTCGGGGTGATGAAGGCGACGCGC
AAGGTGCTCGGCTTCATCCCCGGCTTCTCCTACGACATCGTGGAGACCAGCTGCTGCGGCATGGCTGGCAGCTTCGGGCT
GGAGGCCGAGCATTACGACGCCTCCATGCAGATGGCGGAACTGGCCCTTTTGCCCGCCATGCGCGCGGCGCCGCAGGACG
CCCCGCTCATCGCCAACGGCTTTTCCTGCCGCCACCAGATCGAGCACGGCTCCGGCCGCAAGGCCCGCCACATCGCCCTG
CTCTTGCGCGACGCTCTGGATCTAACGCCCGCCTGA

Upstream 100 bases:

>100_bases
CTCAAGCGCCACGCGGGCTTGGCCCCTGCGCAAAGCACACGGGCGTGGCCATCCCATCGTTTTTCCGAGCTGCGGTGCGT
GCGTCGTCCAGTGACGCACC

Downstream 100 bases:

>100_bases
GCCTTCCGTCGGTTCCGTCTCCTGCCTGATGGCGTCGGCGAGGAAGTCCACGAAGGCGCGAATGCGGGCGGCGAGGTGCG
CGTGGCCCACATAGACCGCG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MEPAPGRHRPSRALEPALFASGTHLASPGANGARGMKTFLDWSAYDTYGIGDAYSGIPATGGNYAKAVAVCMHSRDCRNT
GKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFADPRLDAAMDLCVSCKACKKECPSAVDMTLIKTEYLAQRHE
IKGVPRRTRLFGGVPEWTGRHRRLLRLAIMLRNRSRLLTQAAEKLLGISARRAIPEPAPRPYAEPSAVPTPAHAPAPRGE
VILFVDTFCHHFEPEVAEAAHAVLTHAGYSVRIAQPDPADAEPDRPLCCGRTYLTTGMVEKARGEGQRVLAAFRKEIAAQ
TPIIGLEPSCLLSLRDELYSLGLGPEVGALGKQLFLLEEFLAREHQNKGLRMRLKPLPGPKAVLHGHCHQKAFGVMKATR
KVLGFIPGFSYDIVETSCCGMAGSFGLEAEHYDASMQMAELALLPAMRAAPQDAPLIANGFSCRHQIEHGSGRKARHIAL
LLRDALDLTPA

Sequences:

>Translated_491_residues
MEPAPGRHRPSRALEPALFASGTHLASPGANGARGMKTFLDWSAYDTYGIGDAYSGIPATGGNYAKAVAVCMHSRDCRNT
GKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFADPRLDAAMDLCVSCKACKKECPSAVDMTLIKTEYLAQRHE
IKGVPRRTRLFGGVPEWTGRHRRLLRLAIMLRNRSRLLTQAAEKLLGISARRAIPEPAPRPYAEPSAVPTPAHAPAPRGE
VILFVDTFCHHFEPEVAEAAHAVLTHAGYSVRIAQPDPADAEPDRPLCCGRTYLTTGMVEKARGEGQRVLAAFRKEIAAQ
TPIIGLEPSCLLSLRDELYSLGLGPEVGALGKQLFLLEEFLAREHQNKGLRMRLKPLPGPKAVLHGHCHQKAFGVMKATR
KVLGFIPGFSYDIVETSCCGMAGSFGLEAEHYDASMQMAELALLPAMRAAPQDAPLIANGFSCRHQIEHGSGRKARHIAL
LLRDALDLTPA
>Mature_491_residues
MEPAPGRHRPSRALEPALFASGTHLASPGANGARGMKTFLDWSAYDTYGIGDAYSGIPATGGNYAKAVAVCMHSRDCRNT
GKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFADPRLDAAMDLCVSCKACKKECPSAVDMTLIKTEYLAQRHE
IKGVPRRTRLFGGVPEWTGRHRRLLRLAIMLRNRSRLLTQAAEKLLGISARRAIPEPAPRPYAEPSAVPTPAHAPAPRGE
VILFVDTFCHHFEPEVAEAAHAVLTHAGYSVRIAQPDPADAEPDRPLCCGRTYLTTGMVEKARGEGQRVLAAFRKEIAAQ
TPIIGLEPSCLLSLRDELYSLGLGPEVGALGKQLFLLEEFLAREHQNKGLRMRLKPLPGPKAVLHGHCHQKAFGVMKATR
KVLGFIPGFSYDIVETSCCGMAGSFGLEAEHYDASMQMAELALLPAMRAAPQDAPLIANGFSCRHQIEHGSGRKARHIAL
LLRDALDLTPA

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=370, Percent_Identity=25.6756756756757, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787977, Length=435, Percent_Identity=22.9885057471264, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 53133; Mature: 53133

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAPGRHRPSRALEPALFASGTHLASPGANGARGMKTFLDWSAYDTYGIGDAYSGIPAT
CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GGNYAKAVAVCMHSRDCRNTGKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFA
CCHHHHHHHHHHHCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
DPRLDAAMDLCVSCKACKKECPSAVDMTLIKTEYLAQRHEIKGVPRRTRLFGGVPEWTGR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHH
HRRLLRLAIMLRNRSRLLTQAAEKLLGISARRAIPEPAPRPYAEPSAVPTPAHAPAPRGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VILFVDTFCHHFEPEVAEAAHAVLTHAGYSVRIAQPDPADAEPDRPLCCGRTYLTTGMVE
EEEEHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHH
KARGEGQRVLAAFRKEIAAQTPIIGLEPSCLLSLRDELYSLGLGPEVGALGKQLFLLEEF
HHCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LAREHQNKGLRMRLKPLPGPKAVLHGHCHQKAFGVMKATRKVLGFIPGFSYDIVETSCCG
HHHHHCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
MAGSFGLEAEHYDASMQMAELALLPAMRAAPQDAPLIANGFSCRHQIEHGSGRKARHIAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHH
LLRDALDLTPA
HHHHHHCCCCC
>Mature Secondary Structure
MEPAPGRHRPSRALEPALFASGTHLASPGANGARGMKTFLDWSAYDTYGIGDAYSGIPAT
CCCCCCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GGNYAKAVAVCMHSRDCRNTGKGVMCPSYRITGDKDHSTEARVAAFKAALNDGTDANAFA
CCHHHHHHHHHHHCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
DPRLDAAMDLCVSCKACKKECPSAVDMTLIKTEYLAQRHEIKGVPRRTRLFGGVPEWTGR
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHH
HRRLLRLAIMLRNRSRLLTQAAEKLLGISARRAIPEPAPRPYAEPSAVPTPAHAPAPRGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VILFVDTFCHHFEPEVAEAAHAVLTHAGYSVRIAQPDPADAEPDRPLCCGRTYLTTGMVE
EEEEHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHH
KARGEGQRVLAAFRKEIAAQTPIIGLEPSCLLSLRDELYSLGLGPEVGALGKQLFLLEEF
HHCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LAREHQNKGLRMRLKPLPGPKAVLHGHCHQKAFGVMKATRKVLGFIPGFSYDIVETSCCG
HHHHHCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
MAGSFGLEAEHYDASMQMAELALLPAMRAAPQDAPLIANGFSCRHQIEHGSGRKARHIAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHH
LLRDALDLTPA
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]