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The map label for this gene is 154246613

Identifier: 154246613

GI number: 154246613

Start: 2962865

End: 2963677

Strand: Reverse

Name: 154246613

Synonym: Xaut_2673

Alternate gene names: NA

Gene position: 2963677-2962865 (Counterclockwise)

Preceding gene: 154246614

Following gene: 154246612

Centisome position: 55.82

GC content: 63.1

Gene sequence:

>813_bases
ATGCCAGATGAAAAGCCGATATCCGAGAGTCTCCCAGACACCATGACCTGGGAGATTCTGAACGCTTATGTCGATCAGGA
GCTTGATCCCCGACGAGCGGCCCTCGTCGCTGACGCTGTGGCCCGCGATCATGGCCTGGCGGCGCGCGTCGCCACATTGA
GCAAGCTCAGGGCGACGGCGAGAGAAATGCCCCCTGCATCGCATGCGCCACCGCCGCTTGCGCTCCGGACATTTGCCGGA
TTTTGGTCCCTGCGCGTCATGGCTGTAGCAGCGTCTATTCTGCTCGCCGTCGTCCTTGGCAGCACTCTCCTTTGGCGTGG
GCCTGCGGGGGAAAATGCATCCAGAGACGCGGCCGATGCTATCCATCTCGAATGGCTTTCCGATCAGTCCCTCCCTCCGA
AAGACGCTCCTATCGAGTTCGCTTTGGCTTCGCGATTTATGGGAACATTGCCCGACTTGTCCGCCGCGAACCTCAGATTG
GTGTTTTTGTCGGCGGAACCAGTGGTGGAGGGCCATGGGGTCTTTGGCGGTTACGTTGGCCCTCACGGATGCCGGCTCGG
TCTATCGATCACGCCGTCGCGCGGGGGCGACACGACTATCCGGGAGGGCCGGGAGCCGGGCGGCATGCTCATTCGCGCCT
GGCGGTCTGACGGGGCGGAGTACGCGATCATGAGCCACAGCATGGATCCGGACAGGCTCGACCGCCTGGCGCTGATTGTC
GCTGAACTGGTGCGGCAGCGTGGTCCGACGACGGACGAGCAGGAGATTGCCTTGCGCGCGACGGAGACCGTCGGAAAGGC
GTGCGCGGTTTAG

Upstream 100 bases:

>100_bases
CCCCTCGGGACTGTGATGAGCCGCTTGAGCCGTGCGCGGGCGGCGCTGCTCGACCGGATTACGGCCGACAACATTCGCCC
CATTGCGACAGACAGACGCC

Downstream 100 bases:

>100_bases
GATGGTGTGTCGAGGCGAGGGAATAAAAGTCCGGGGCTGTCCGTCTCTACTGATGAAACAAGGAATGTCTCTTAGGGAGG
AGCGCGATGTTGAACAGACG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPDEKPISESLPDTMTWEILNAYVDQELDPRRAALVADAVARDHGLAARVATLSKLRATAREMPPASHAPPPLALRTFAG
FWSLRVMAVAASILLAVVLGSTLLWRGPAGENASRDAADAIHLEWLSDQSLPPKDAPIEFALASRFMGTLPDLSAANLRL
VFLSAEPVVEGHGVFGGYVGPHGCRLGLSITPSRGGDTTIREGREPGGMLIRAWRSDGAEYAIMSHSMDPDRLDRLALIV
AELVRQRGPTTDEQEIALRATETVGKACAV

Sequences:

>Translated_270_residues
MPDEKPISESLPDTMTWEILNAYVDQELDPRRAALVADAVARDHGLAARVATLSKLRATAREMPPASHAPPPLALRTFAG
FWSLRVMAVAASILLAVVLGSTLLWRGPAGENASRDAADAIHLEWLSDQSLPPKDAPIEFALASRFMGTLPDLSAANLRL
VFLSAEPVVEGHGVFGGYVGPHGCRLGLSITPSRGGDTTIREGREPGGMLIRAWRSDGAEYAIMSHSMDPDRLDRLALIV
AELVRQRGPTTDEQEIALRATETVGKACAV
>Mature_269_residues
PDEKPISESLPDTMTWEILNAYVDQELDPRRAALVADAVARDHGLAARVATLSKLRATAREMPPASHAPPPLALRTFAGF
WSLRVMAVAASILLAVVLGSTLLWRGPAGENASRDAADAIHLEWLSDQSLPPKDAPIEFALASRFMGTLPDLSAANLRLV
FLSAEPVVEGHGVFGGYVGPHGCRLGLSITPSRGGDTTIREGREPGGMLIRAWRSDGAEYAIMSHSMDPDRLDRLALIVA
ELVRQRGPTTDEQEIALRATETVGKACAV

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28958; Mature: 28827

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEKPISESLPDTMTWEILNAYVDQELDPRRAALVADAVARDHGLAARVATLSKLRATA
CCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
REMPPASHAPPPLALRTFAGFWSLRVMAVAASILLAVVLGSTLLWRGPAGENASRDAADA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHH
IHLEWLSDQSLPPKDAPIEFALASRFMGTLPDLSAANLRLVFLSAEPVVEGHGVFGGYVG
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PHGCRLGLSITPSRGGDTTIREGREPGGMLIRAWRSDGAEYAIMSHSMDPDRLDRLALIV
CCCEEEEEEECCCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHH
AELVRQRGPTTDEQEIALRATETVGKACAV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDEKPISESLPDTMTWEILNAYVDQELDPRRAALVADAVARDHGLAARVATLSKLRATA
CCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
REMPPASHAPPPLALRTFAGFWSLRVMAVAASILLAVVLGSTLLWRGPAGENASRDAADA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHH
IHLEWLSDQSLPPKDAPIEFALASRFMGTLPDLSAANLRLVFLSAEPVVEGHGVFGGYVG
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PHGCRLGLSITPSRGGDTTIREGREPGGMLIRAWRSDGAEYAIMSHSMDPDRLDRLALIV
CCCEEEEEEECCCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHH
AELVRQRGPTTDEQEIALRATETVGKACAV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA