Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246612
Identifier: 154246612
GI number: 154246612
Start: 2961561
End: 2962778
Strand: Reverse
Name: 154246612
Synonym: Xaut_2672
Alternate gene names: NA
Gene position: 2962778-2961561 (Counterclockwise)
Preceding gene: 154246613
Following gene: 154246611
Centisome position: 55.81
GC content: 62.32
Gene sequence:
>1218_bases ATGTTGAACAGACGGCAGATGCTGAAATCTGCGGGCGGTACGGCCTTAGGAATCGGTGCGGGGCTTGCCGTGGGGGCACG ACTCACGGCGTTCGCCGCGGAAACCGTGACTCTGCCCTTCGCCAACGGCGACCGTGAGCTCGTCGCCTATCCGGGCAAGC GGCCTCTGATCAGGCTGACGACCCGGCCGCCTCAGCTCGAGACGCCCTTCAGCGTCTACAATGACGGCTTGATCACGCCA AACGATGCCTTCTTCGTGCGCTACCATCTTGCGGATATCCCGACCGAAATCGATCCGGAGAGCTTCCGTGTCGAGGTCAA GGGCAAGGTCGATAAGCCGCTGTCCTTGTCGCTGATGGACCTCAAATCCCGCTTTGACGCGGTCGAGCTGGTCGCTGTCC ACCAATGCTCGGGCAACAGCCGCGGGTTCTTCGAGCCCCGCGTTGGCGGCGGACAAGCCGGCAACGGGCTGATGGGAAAT GCGCGATGGAAGGGGGTACCTCTCAAGGCCGTGCTGGACAAGGCCGGCGTGCAAGCGGGCGCGGTTCAGGTTTCGTTCGG CGGTCTCGATGGTCCCGTCGTGCCGGATACGCCGGATTTCGCGAAGGCGCTCGATATCGACCACGCGCGGGATGGCGAGG TCATGCTCGCCTATGAGATGAACGGCGCCGAATTGCCTTGGCTCAACGGCTATCCCCTGCGCCTCGTGGTGCCCGGTTTC TATGGCACCTACTGGGTGAAGCACCTCAACGAAATCACGGTGCTCGACAAGCCGTTCCAAAGCTTCTGGATGGACACCGC CTATCGCATCCCCGCGAATGCATGCGCCTGTACGGAGCCCGGCAAGGCACCCACTGCGACAGTCCCGATCAATCGCTTCG ACGTGCGCAGCTTCATCACGAGCGTTCAGGACGGGGCGAAATTGAAGGCGGGCGAGCTTGCTTTGCGCGGAATCGCTTTC GATGGCGGCTACGGCGTCAGCGACGTCGAGGTCTCGGCAGACGGTGGAAAATCCTGGCAGGCCGCGTCGCTCGGCGAAGA CCTCGGCAAGTACTCCTTCCGTGAGTGGAAAATGACGATACCTCTCCAAAAGGGCGCTCACACTCTGATGGTCCGCGCGG TCAACCGGATCGGCCAGTCGCAACCGATGGAGCCGCTATGGAATCCGGCAGGCTACATGCGCAACGTCGTCGAACACACA CGCATCGTTGCAGCATAG
Upstream 100 bases:
>100_bases CGTGCGCGGTTTAGGATGGTGTGTCGAGGCGAGGGAATAAAAGTCCGGGGCTGTCCGTCTCTACTGATGAAACAAGGAAT GTCTCTTAGGGAGGAGCGCG
Downstream 100 bases:
>100_bases GGAGGAAACCATGAGACACAAAGTTAAAATCGTTTCGGTGAGCTTCCTTGCAGTAGCCTTGGCCGGTGCGGCGCTGGCTG CGCCGAAGACCTATCAGCTC
Product: molybdopterin binding oxidoreductase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Membrane-Bound Oxidoreductase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfite Oxidase-Like Protein; Sulfur Oxidation Molybdopterin C Protein; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Mo-Co Oxidoreductase Dimerisation Subunit; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfite Oxidase Molybdopterin Subunit; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLNRRQMLKSAGGTALGIGAGLAVGARLTAFAAETVTLPFANGDRELVAYPGKRPLIRLTTRPPQLETPFSVYNDGLITP NDAFFVRYHLADIPTEIDPESFRVEVKGKVDKPLSLSLMDLKSRFDAVELVAVHQCSGNSRGFFEPRVGGGQAGNGLMGN ARWKGVPLKAVLDKAGVQAGAVQVSFGGLDGPVVPDTPDFAKALDIDHARDGEVMLAYEMNGAELPWLNGYPLRLVVPGF YGTYWVKHLNEITVLDKPFQSFWMDTAYRIPANACACTEPGKAPTATVPINRFDVRSFITSVQDGAKLKAGELALRGIAF DGGYGVSDVEVSADGGKSWQAASLGEDLGKYSFREWKMTIPLQKGAHTLMVRAVNRIGQSQPMEPLWNPAGYMRNVVEHT RIVAA
Sequences:
>Translated_405_residues MLNRRQMLKSAGGTALGIGAGLAVGARLTAFAAETVTLPFANGDRELVAYPGKRPLIRLTTRPPQLETPFSVYNDGLITP NDAFFVRYHLADIPTEIDPESFRVEVKGKVDKPLSLSLMDLKSRFDAVELVAVHQCSGNSRGFFEPRVGGGQAGNGLMGN ARWKGVPLKAVLDKAGVQAGAVQVSFGGLDGPVVPDTPDFAKALDIDHARDGEVMLAYEMNGAELPWLNGYPLRLVVPGF YGTYWVKHLNEITVLDKPFQSFWMDTAYRIPANACACTEPGKAPTATVPINRFDVRSFITSVQDGAKLKAGELALRGIAF DGGYGVSDVEVSADGGKSWQAASLGEDLGKYSFREWKMTIPLQKGAHTLMVRAVNRIGQSQPMEPLWNPAGYMRNVVEHT RIVAA >Mature_405_residues MLNRRQMLKSAGGTALGIGAGLAVGARLTAFAAETVTLPFANGDRELVAYPGKRPLIRLTTRPPQLETPFSVYNDGLITP NDAFFVRYHLADIPTEIDPESFRVEVKGKVDKPLSLSLMDLKSRFDAVELVAVHQCSGNSRGFFEPRVGGGQAGNGLMGN ARWKGVPLKAVLDKAGVQAGAVQVSFGGLDGPVVPDTPDFAKALDIDHARDGEVMLAYEMNGAELPWLNGYPLRLVVPGF YGTYWVKHLNEITVLDKPFQSFWMDTAYRIPANACACTEPGKAPTATVPINRFDVRSFITSVQDGAKLKAGELALRGIAF DGGYGVSDVEVSADGGKSWQAASLGEDLGKYSFREWKMTIPLQKGAHTLMVRAVNRIGQSQPMEPLWNPAGYMRNVVEHT RIVAA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=374, Percent_Identity=33.4224598930481, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI74099702, Length=374, Percent_Identity=33.4224598930481, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI74099694, Length=374, Percent_Identity=33.4224598930481, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI71992535, Length=398, Percent_Identity=30.4020100502513, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI18859905, Length=376, Percent_Identity=30.0531914893617, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43837; Mature: 43837
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRQMLKSAGGTALGIGAGLAVGARLTAFAAETVTLPFANGDRELVAYPGKRPLIRLT CCCHHHHHHHCCCCEEECCCHHHHHHHHEEEEEEEEEEEECCCCCEEEECCCCCCEEEEE TRPPQLETPFSVYNDGLITPNDAFFVRYHLADIPTEIDPESFRVEVKGKVDKPLSLSLMD CCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEHHHH LKSRFDAVELVAVHQCSGNSRGFFEPRVGGGQAGNGLMGNARWKGVPLKAVLDKAGVQAG HHHHCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCCC AVQVSFGGLDGPVVPDTPDFAKALDIDHARDGEVMLAYEMNGAELPWLNGYPLRLVVPGF EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC YGTYWVKHLNEITVLDKPFQSFWMDTAYRIPANACACTEPGKAPTATVPINRFDVRSFIT HHHHHHHHCCCEEEECCCHHHHHCCCCEECCCCCEECCCCCCCCEEEECCCHHHHHHHHH SVQDGAKLKAGELALRGIAFDGGYGVSDVEVSADGGKSWQAASLGEDLGKYSFREWKMTI HHHCCCCEECCCEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEE PLQKGAHTLMVRAVNRIGQSQPMEPLWNPAGYMRNVVEHTRIVAA ECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECC >Mature Secondary Structure MLNRRQMLKSAGGTALGIGAGLAVGARLTAFAAETVTLPFANGDRELVAYPGKRPLIRLT CCCHHHHHHHCCCCEEECCCHHHHHHHHEEEEEEEEEEEECCCCCEEEECCCCCCEEEEE TRPPQLETPFSVYNDGLITPNDAFFVRYHLADIPTEIDPESFRVEVKGKVDKPLSLSLMD CCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEHHHH LKSRFDAVELVAVHQCSGNSRGFFEPRVGGGQAGNGLMGNARWKGVPLKAVLDKAGVQAG HHHHCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHCCCCCC AVQVSFGGLDGPVVPDTPDFAKALDIDHARDGEVMLAYEMNGAELPWLNGYPLRLVVPGF EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC YGTYWVKHLNEITVLDKPFQSFWMDTAYRIPANACACTEPGKAPTATVPINRFDVRSFIT HHHHHHHHCCCEEEECCCHHHHHCCCCEECCCCCEECCCCCCCCEEEECCCHHHHHHHHH SVQDGAKLKAGELALRGIAFDGGYGVSDVEVSADGGKSWQAASLGEDLGKYSFREWKMTI HHHCCCCEECCCEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEE PLQKGAHTLMVRAVNRIGQSQPMEPLWNPAGYMRNVVEHTRIVAA ECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA