Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is hemK [H]
Identifier: 154246563
GI number: 154246563
Start: 2908112
End: 2908972
Strand: Reverse
Name: hemK [H]
Synonym: Xaut_2622
Alternate gene names: 154246563
Gene position: 2908972-2908112 (Counterclockwise)
Preceding gene: 154246564
Following gene: 154246562
Centisome position: 54.79
GC content: 74.33
Gene sequence:
>861_bases GTGGCTGAAGCCCTGACCATCGGCACTCTGCGCCGGCAGATGGCGGCATCCCTCGCTGCGGCGGGCGTGGAGACGCCGGA CCTCGACGCCCGCCTGCTGCTGGCGCAGGCGCTCGGCTGCGCGCCGGGCGATCTTCTCCTGCGCGCCGACGCGCCCGTCC CGTCCGAGGCGGAGGTGACGGCGCGCGCCTTCACGAAACGACGGGCGGGCGGCGAGCCGGTGGCGCGCATTCGCGGCCGG CGGGAGTTCTGGAGTCTCGACCTTCACCTCTCCCCGGACACCTTGGTGCCCCGCCCCGATACCGAGACCCTGGTGGAGGC GGCCCTCGCCGCGCTGCCCGACCGAACCGCACCCCTCTCCATCCTCGATCTGGGCACGGGCACGGGCGCGATCCTCGCCG CCTTGCTGGTGGAGTGTCCCAACGCCACCGGCATCGCCGTGGACCGCTCAGAGGGCGCGGCCTTGACCGCGCGCGCCAAT CTCGCCCGCAACGGCCTCGCCGCGCGCGCCCATGTGATGGTCGGCGACTGGGGAACGGCGCTGGCCGGCGGCTTCGACCT CGTGGTCTCCAACCCGCCCTACATCACCTCTTCGGCCATGCTGGACCTGCCCGCCGAAGTCCGCCTGCACGACCCTCATC TCGCGTTGGAGGCCGGGGCGGACGGCCTCCTCGCCTATGAAGCCATCGCCGCCGACCTGCCGCGCCTCGTGCGCCGAGGC GGCATCGCCGTGCTGGAGCTGGGCGAGGGACAGGAAGCGGCCGTGGCGGCGCTGGTCGCGGCGGCGGGACTTGAGGTGGC AGGTCCGGCGCGGCGCGATCTTTCGGGCATCCCCAGGGCCCTCCTCGCCCGCCGCGGGTAG
Upstream 100 bases:
>100_bases ACGGCGCTGGACGAGATCATCGATCCGCTGCTCACCGAACACCAGGCCGCTTTGCTCGCCGCGGCCGAGGACGCCTGAGC CGTGGGCAAGGGCCCTGCTT
Downstream 100 bases:
>100_bases GGCCAGGTAGCGGCAAATGGCGGCGCCCCAAGGCAAGCAGCGCGCAAGCTGAGAAAAAACCGCTTGGAACCTGGGAGGGA AATGGCTAGTGTCTTTTTCA
Product: HemK family modification methylase
Products: NA
Alternate protein names: M.MloHemKP [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAEALTIGTLRRQMAASLAAAGVETPDLDARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGR REFWSLDLHLSPDTLVPRPDTETLVEAALAALPDRTAPLSILDLGTGTGAILAALLVECPNATGIAVDRSEGAALTARAN LARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLPAEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRG GIAVLELGEGQEAAVAALVAAAGLEVAGPARRDLSGIPRALLARRG
Sequences:
>Translated_286_residues MAEALTIGTLRRQMAASLAAAGVETPDLDARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGR REFWSLDLHLSPDTLVPRPDTETLVEAALAALPDRTAPLSILDLGTGTGAILAALLVECPNATGIAVDRSEGAALTARAN LARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLPAEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRG GIAVLELGEGQEAAVAALVAAAGLEVAGPARRDLSGIPRALLARRG >Mature_285_residues AEALTIGTLRRQMAASLAAAGVETPDLDARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGRR EFWSLDLHLSPDTLVPRPDTETLVEAALAALPDRTAPLSILDLGTGTGAILAALLVECPNATGIAVDRSEGAALTARANL ARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLPAEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRGG IAVLELGEGQEAAVAALVAAAGLEVAGPARRDLSGIPRALLARRG
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=251, Percent_Identity=33.0677290836653, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1787463, Length=274, Percent_Identity=39.4160583941606, Blast_Score=141, Evalue=6e-35, Organism=Escherichia coli, GI87082085, Length=197, Percent_Identity=30.9644670050761, Blast_Score=82, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324266, Length=160, Percent_Identity=31.25, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24582226, Length=267, Percent_Identity=26.9662921348315, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 29384; Mature: 29253
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEALTIGTLRRQMAASLAAAGVETPDLDARLLLAQALGCAPGDLLLRADAPVPSEAEVT CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH ARAFTKRRAGGEPVARIRGRREFWSLDLHLSPDTLVPRPDTETLVEAALAALPDRTAPLS HHHHHHHCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEE ILDLGTGTGAILAALLVECPNATGIAVDRSEGAALTARANLARNGLAARAHVMVGDWGTA EEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHCCCCEEEEEEECCCHHH LAGGFDLVVSNPPYITSSAMLDLPAEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRG HCCCEEEEECCCCCEECCCEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHC GIAVLELGEGQEAAVAALVAAAGLEVAGPARRDLSGIPRALLARRG CEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCC >Mature Secondary Structure AEALTIGTLRRQMAASLAAAGVETPDLDARLLLAQALGCAPGDLLLRADAPVPSEAEVT CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH ARAFTKRRAGGEPVARIRGRREFWSLDLHLSPDTLVPRPDTETLVEAALAALPDRTAPLS HHHHHHHCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEE ILDLGTGTGAILAALLVECPNATGIAVDRSEGAALTARANLARNGLAARAHVMVGDWGTA EEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHCCCCEEEEEEECCCHHH LAGGFDLVVSNPPYITSSAMLDLPAEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRG HCCCEEEEECCCCCEECCCEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHC GIAVLELGEGQEAAVAALVAAAGLEVAGPARRDLSGIPRALLARRG CEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]