Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is osmC [H]
Identifier: 154246391
GI number: 154246391
Start: 2736859
End: 2737290
Strand: Reverse
Name: osmC [H]
Synonym: Xaut_2450
Alternate gene names: 154246391
Gene position: 2737290-2736859 (Counterclockwise)
Preceding gene: 154246401
Following gene: 154246388
Centisome position: 51.56
GC content: 68.75
Gene sequence:
>432_bases ATGGCGATCATCCGCACCGGCTCGGCCCAGTGGAGCGGCGGCATCAAGGACGGCAAGGGCGCGATCTCCACCGAGAGCGG CGCGCTGTCCGCCTATCCCTACGGCTTCGCCAGCCGCTTTGAGAACCAGAAGGGCTCGAACCCCGAGGAGCTTCTGGGCG CCGCCCACGCCGCCTGCTTCACCATGGCGCTCTCGCTCATCCTCGGCGGGGCCGGCCTCACCGCCACCGATCTCCAGACC TCCGCCAAGGTGTCGCTGGAGAAGAAGGAGGCGGGCTACGAGATCACCGCCGTGGACCTCACCCTCACAGGCATCGTCCC CGGCGCCACCCCGGAGCAGTTCGCGGAACTGGCGGACACTGCCAAGGCCAACTGCCCCCTCTCCAAGGTGATCCGCGCCG CCATCAGCCTCGACGCCACGCTGAAGAGCTGA
Upstream 100 bases:
>100_bases CGATTTGCCCGCCCGATTGTTGAGCCCGAGGTCGGGCGCCGAAACCGATGGGCACGGTCCTCGCCCGCGACAGGCCCCCC GGACCAACAAGGAGACGAAC
Downstream 100 bases:
>100_bases GGGTCAGCCCTCAGCCCTCACGCCGCCGATTTTTCCCAGTCGGCGGCGTGGGGTACCGCGTCGGCGATCATGCGATAGGA GGCGAGGCGCTTGTGGTGGT
Product: OsmC family protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAIIRTGSAQWSGGIKDGKGAISTESGALSAYPYGFASRFENQKGSNPEELLGAAHAACFTMALSLILGGAGLTATDLQT SAKVSLEKKEAGYEITAVDLTLTGIVPGATPEQFAELADTAKANCPLSKVIRAAISLDATLKS
Sequences:
>Translated_143_residues MAIIRTGSAQWSGGIKDGKGAISTESGALSAYPYGFASRFENQKGSNPEELLGAAHAACFTMALSLILGGAGLTATDLQT SAKVSLEKKEAGYEITAVDLTLTGIVPGATPEQFAELADTAKANCPLSKVIRAAISLDATLKS >Mature_142_residues AIIRTGSAQWSGGIKDGKGAISTESGALSAYPYGFASRFENQKGSNPEELLGAAHAACFTMALSLILGGAGLTATDLQTS AKVSLEKKEAGYEITAVDLTLTGIVPGATPEQFAELADTAKANCPLSKVIRAAISLDATLKS
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=143, Percent_Identity=55.2447552447552, Blast_Score=161, Evalue=2e-41,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 14608; Mature: 14476
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIRTGSAQWSGGIKDGKGAISTESGALSAYPYGFASRFENQKGSNPEELLGAAHAACF CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH TMALSLILGGAGLTATDLQTSAKVSLEKKEAGYEITAVDLTLTGIVPGATPEQFAELADT HHHHHHHHCCCCCCHHCCCCCHHEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHH AKANCPLSKVIRAAISLDATLKS HCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIIRTGSAQWSGGIKDGKGAISTESGALSAYPYGFASRFENQKGSNPEELLGAAHAACF EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH TMALSLILGGAGLTATDLQTSAKVSLEKKEAGYEITAVDLTLTGIVPGATPEQFAELADT HHHHHHHHCCCCCCHHCCCCCHHEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHH AKANCPLSKVIRAAISLDATLKS HCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]