Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246386
Identifier: 154246386
GI number: 154246386
Start: 2732410
End: 2733009
Strand: Direct
Name: 154246386
Synonym: Xaut_2445
Alternate gene names: NA
Gene position: 2732410-2733009 (Clockwise)
Preceding gene: 154246385
Following gene: 154246389
Centisome position: 51.47
GC content: 74.83
Gene sequence:
>600_bases ATGGATGCGGTGGATGCGCCCGCCCTCGGCCGCGCGGCCCGCCTGAAGGCGGAAACGGCGGCGGTCCATGGCCGGCTCGA TGCCCGGATCATGGCGGCGGGCGCGTTCACGGACCGCGCCGGCTATGGGCGCTTCCTGCTGTTTCAACGCCTGCTCCACG AGGACGGCGCGCCGCTGTACGGCCATCCGGCGCTGGCCGGGCTGCTGGCAGAGGCCGGCGTGGGTGCGCGGCTCCATCTG GTGGAGCGCGACCTCGCGGATCTCGGCCAGCCGCGCAGCCGCCCGGCCGGTGCGCCGGAGCCGGCTTTCGCGATGGGCCT GCCCGATGCCGCCCCTGCGCTGGGCTGGCTCTATGTGCTGGAAGGCTCGCGCCTCGGCGGCGCCGTGCTGCTGAAGGGCG CGCAGGGGCTGGGGCTGACGGCCGCGTTCGGCGCCCACCACCTCGCCCCGGCGCACGAGGGTGTCCTGGCCCATTGGCGG CGCTTCACCGCCGGGCTGGAGGACGCGGATCTGGACGGTGTCGGCGAGCAGCAGATGATCGCGGGCGCCATCGCCGCCTT CCAGCGGGCGCATGCGCTGGCTGATTTCGCCTTCGGCTGA
Upstream 100 bases:
>100_bases ATGGTCCAGAGCCTCAACGGCACGCTGGAGGACCTCGACAACGCCCCCGGCCTGCGCACCGTCGTCACCGCGCCGATCGG CATCGGCTAGGGCCGCCGGG
Downstream 100 bases:
>100_bases GCGGGGATTTCCTCTTCAAGCCCGCGCGGCACCTGAGCGGAAGCGTCCCTCTTCAGCCCGCGCGGCGCCTGAGCGAGGCC CTCCTTCTCAGACCGCGTGG
Product: heme oxygenase
Products: NA
Alternate protein names: Haem Utilisation Protein; Heme Oxygenase Family Protein; Iron-Starvation Protein; Iron-Starvation Protein PigA; Heme Oxygenase Superfamily; Heme Oxygenase-Like Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDAVDAPALGRAARLKAETAAVHGRLDARIMAAGAFTDRAGYGRFLLFQRLLHEDGAPLYGHPALAGLLAEAGVGARLHL VERDLADLGQPRSRPAGAPEPAFAMGLPDAAPALGWLYVLEGSRLGGAVLLKGAQGLGLTAAFGAHHLAPAHEGVLAHWR RFTAGLEDADLDGVGEQQMIAGAIAAFQRAHALADFAFG
Sequences:
>Translated_199_residues MDAVDAPALGRAARLKAETAAVHGRLDARIMAAGAFTDRAGYGRFLLFQRLLHEDGAPLYGHPALAGLLAEAGVGARLHL VERDLADLGQPRSRPAGAPEPAFAMGLPDAAPALGWLYVLEGSRLGGAVLLKGAQGLGLTAAFGAHHLAPAHEGVLAHWR RFTAGLEDADLDGVGEQQMIAGAIAAFQRAHALADFAFG >Mature_199_residues MDAVDAPALGRAARLKAETAAVHGRLDARIMAAGAFTDRAGYGRFLLFQRLLHEDGAPLYGHPALAGLLAEAGVGARLHL VERDLADLGQPRSRPAGAPEPAFAMGLPDAAPALGWLYVLEGSRLGGAVLLKGAQGLGLTAAFGAHHLAPAHEGVLAHWR RFTAGLEDADLDGVGEQQMIAGAIAAFQRAHALADFAFG
Specific function: Unknown
COG id: COG3230
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20578; Mature: 20578
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVDAPALGRAARLKAETAAVHGRLDARIMAAGAFTDRAGYGRFLLFQRLLHEDGAPLY CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC GHPALAGLLAEAGVGARLHLVERDLADLGQPRSRPAGAPEPAFAMGLPDAAPALGWLYVL CCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEE EGSRLGGAVLLKGAQGLGLTAAFGAHHLAPAHEGVLAHWRRFTAGLEDADLDGVGEQQMI ECCCCCCEEEEECCCCCCEEHHHCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AGAIAAFQRAHALADFAFG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAVDAPALGRAARLKAETAAVHGRLDARIMAAGAFTDRAGYGRFLLFQRLLHEDGAPLY CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC GHPALAGLLAEAGVGARLHLVERDLADLGQPRSRPAGAPEPAFAMGLPDAAPALGWLYVL CCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEE EGSRLGGAVLLKGAQGLGLTAAFGAHHLAPAHEGVLAHWRRFTAGLEDADLDGVGEQQMI ECCCCCCEEEEECCCCCCEEHHHCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AGAIAAFQRAHALADFAFG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA