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The map label for this gene is yecS [H]

Identifier: 154246380

GI number: 154246380

Start: 2725880

End: 2726584

Strand: Direct

Name: yecS [H]

Synonym: Xaut_2439

Alternate gene names: 154246380

Gene position: 2725880-2726584 (Clockwise)

Preceding gene: 154246379

Following gene: 154246381

Centisome position: 51.35

GC content: 64.82

Gene sequence:

>705_bases
ATGCCCTATGAACTCAGGCTGGAGGTGCTCGCGCAATATCGCGAGCAGCTTTTCGACGGGCTCCTGATGACCGTCTGGCT
GTCGGTGGCCTCCATCGCCGCCGGGACCTTCTTCGGCGTGGTGCTCGCCTCGCTGCGCAGCGTGCGCGGGGGGCCGGTGC
GCTTCCTGGTAGATGCCTATGTGGAAGTGATCCGCAACACCCCGTTCCTGGTCCAGCTGTTCATCATCTATTTCGGCCTG
CCCACTCTGGGCTTCCGGGTGGGGGCGGTGACGGCGGCCCTCATCGGCATGACCATCAATCTGGCCGCCTATTCCACGGA
GATCATCCGCGCCGGCATCGAATCCATCCACAAGTCGCAGATCGAGGCGGGCGAAGCTTTGGGCCTCACCCAGCTGCAGA
TCTACCGCGACATCATCATTCTGCCGGCGGTGGCGAAGGTCTATCCCTCCCTGTGCAGCCAGTTCGTCCTGATGATGCTG
GCCTCCAGCGTGTGCTCGGCGATCTCCACGCCGGAATTGACTGCCGCCGCCTCCTACGCCCAGTCGCAGAGCTATCGCTC
ATTCGAGGTCTATATCGCGGTCACGCTGATCTATCTGGCGCTGGCGCTGACCTTGCGCGGCGCGCTCGCGCTCATCGGCT
GGCGCCTGTTCGGGCGACCCGGCGGGCGCGCCGTACAGCCCACCCTCAAGGTGGAGGCGGTGTGA

Upstream 100 bases:

>100_bases
TCCGGCCAGCTCGACGCCATCGCGGTGAAATGGACCGGCGAGCCCTTCCCGGCGAGCCTGCCCACCTTCTGATTTCGTCG
CCGCGCAGAGAGGCTTCGCC

Downstream 100 bases:

>100_bases
TGTTCCTGCGCAGCTTCGGCCTCAATGAATTCTACTTCCTGCTCGAAAGCCTCCAGTGGACGCTGGCCCTCACGGGGCTG
GCCATGGTGGGCGGCGGCAT

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAYVEVIRNTPFLVQLFIIYFGL
PTLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQIEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMML
ASSVCSAISTPELTAAASYAQSQSYRSFEVYIAVTLIYLALALTLRGALALIGWRLFGRPGGRAVQPTLKVEAV

Sequences:

>Translated_234_residues
MPYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAYVEVIRNTPFLVQLFIIYFGL
PTLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQIEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMML
ASSVCSAISTPELTAAASYAQSQSYRSFEVYIAVTLIYLALALTLRGALALIGWRLFGRPGGRAVQPTLKVEAV
>Mature_233_residues
PYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAYVEVIRNTPFLVQLFIIYFGLP
TLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQIEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLA
SSVCSAISTPELTAAASYAQSQSYRSFEVYIAVTLIYLALALTLRGALALIGWRLFGRPGGRAVQPTLKVEAV

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=190, Percent_Identity=37.3684210526316, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787030, Length=191, Percent_Identity=34.5549738219895, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=26.7281105990783, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=27.8301886792453, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786874, Length=233, Percent_Identity=28.755364806867, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787086, Length=203, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787087, Length=205, Percent_Identity=23.4146341463415, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788646, Length=204, Percent_Identity=23.0392156862745, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25415; Mature: 25284

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VEVIRNTPFLVQLFIIYFGLPTLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQ
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLASSVCSAISTPELTAAASYA
HHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QSQSYRSFEVYIAVTLIYLALALTLRGALALIGWRLFGRPGGRAVQPTLKVEAV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
PYELRLEVLAQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VEVIRNTPFLVQLFIIYFGLPTLGFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQ
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAGEALGLTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLASSVCSAISTPELTAAASYA
HHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QSQSYRSFEVYIAVTLIYLALALTLRGALALIGWRLFGRPGGRAVQPTLKVEAV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]